Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3296 ATGGAAAGCCAAGACCCACCAAACCCACCACCACCACCATTATTGATTCCACCCCAAAACAACAACAATATTAATTTTCCAATATTTCCCTTCACACCTTTGCCATTGGAATTACCTCATCATCAAGGCCTAATTGGAGACATCATCAATGACTATTGGGGTAACATTATTTTCTCTTCTGGCCACAATAGCTTGTTATGTGATGCCAATAATAACAAGGAAACACTAATGGAATGCGCTTCTTCTCCGTCTTCCTCCTTCATGGTTGAAAATAGTAACAATAATGTTATCATTGGGACTCCTGAAGAGGTCGAAAAGCGAAAGAAGGAGACGAGAAAATTAGGAGGAAGAGTGAAGAAGACGACTCGAGTGCCGAGGTTCGCCTTTCAAACTAGAAGTGCTGATGATATCTTGGATGATGGTTACCGTTGGAGGAAGTATGGCCAGAAAGCTGTGAAGAATAGCACATACCCTAGGAGCTACTACCGATGCACGCATCACACATGCAATGTGAAGAAACAAGTGCAGAGGCTATCAAAGGACACAAGCATAGTTGTGACTACGTACGAGGGAATTCACAACCATCCATGCGAGAAGCTCATGGAAACCCTCACCCCTCTTCTCAAGCAGATTCAGTTTCTTGCTTCCATCTAA 654 0.4312 MESQDPPNPPPPPLLIPPQNNNNINFPIFPFTPLPLELPHHQGLIGDIINDYWGNIIFSSGHNSLLCDANNNKETLMECASSPSSSFMVENSNNNVIIGTPEEVEKRKKETRKLGGRVKKTTRVPRFAFQTRSADDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASI* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3296 217 Pfam WRKY DNA -binding domain 139 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g3296 217 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 94 213 IPR044810 GO:0003700
Aev06g3296 217 SUPERFAMILY WRKY DNA-binding domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev06g3296 217 Gene3D WRKY domain 112 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev06g3296 217 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 94 213 - -
Aev06g3296 217 SMART WRKY_cls 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g3296 217 ProSiteProfiles WRKY domain profile. 133 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3296 Aev-Chr6 34311531 34313059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3296 116 217 WRKY Transcription Factor Family AT1G64000 73.529 3.33e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev06g3296 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3296 - - cam:101497701 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3296 06 34311531 34313059 Aev02g0241 02 1754982 1755947 PCT