Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3293 ATGTCAATTCCCACTAATTGCACACCTTATCATCTCTCTCTCTCTCACATTCTTACCATAACCAAAAGTCAGCGCCTTCTTTTGTCTCTCTCTCTCTCTGAAGAAACAGAGCCAAACAGGGTTTTCAGACATTGCAGAGAGCAACCTCTGTCTCTAATGGAGCAAGATTGGGATCTCCATGCGGTTGTTAGAGGCTGTTCTTCTCTTCTAACATCTTCAACAACAACAACAACCACAACTACATCATCATCATCATCTTCTTCTTCTGGTTTTGGGAATAATTGTTACTTATACCCTGAATCTGCTTCTTCTTCATCTTCTTCTTCTTGTGCTGGTGCTGGATTTTCCTCTGTTTTTGATTGTGAACAAGCTCTGTCACTTAACCCCATTGAAGAGTTGCATGAGCTTTGCAAGCCTTTCTTCACCACAAAATCACAGCCTCAATTTCAAGCTTCTTCTCCTCTCTCTTCATCTTTCTCTTACTCTTCTTCTCTACCCAAACAGCCTCAGACACAAGAGAAACAACAACGTAGTAAGAATCTTCTTCTCTCAGGTGGTTCTGTACTCACAACCCCACGATCTAAAAGAAGGAAGAATCAGCTTAAGAGAGTTTGTGAAGTGCCAGTTGAGAATCTCTCCTCTGACATTTGGGCATGGAGGAAATATGGCCAGAAACCCATCAAAGGGTCACCTTATCCAAGGGGATACTACAGATGTAGCAGCTCAAAAGGTTGTTTAGCAAGAAAACAAGTTGAAAGAAACAGATCAGACCCAACAATGTTCATAGTGACCTACACAGCAGAACACAACCACCCTGCTCCAACTCACAGAAACTCCCTTGCTGGCTCCACACGCCAGAAGCCACTAGCACCACAATCAGCCACCACGGCCGGAGGCGGCGGAGAATCCGAAACCGGCGAAAAGGCCTTAGCAAAACCAGCATTATCTCCTATTACACCAGTTGCAGAAGAGGAGGCTCAACCACAGGAGGAAAAGTTAGAGAGCAGAGAAGGGAAAGAAGAGGATGTGATGGATGATGATGAGGAGGAAGGTGAGTTTGGTGTGTGTGATATGGTGATACCAGATGATTTCTTTGAGAGTTTGGATGAATTGGGTCAATTCACTGGCTTTGATGATGCAATCACTGCTGGAGATTTCTTCAATGATCCCTTTTCAGCTTTGCCAATTCCTTCTTGGTTGGCCGCTGCCACTGCTGCTAGTGGTAGCTGA 1230 0.4455 MSIPTNCTPYHLSLSHILTITKSQRLLLSLSLSEETEPNRVFRHCREQPLSLMEQDWDLHAVVRGCSSLLTSSTTTTTTTTSSSSSSSSGFGNNCYLYPESASSSSSSSCAGAGFSSVFDCEQALSLNPIEELHELCKPFFTTKSQPQFQASSPLSSSFSYSSSLPKQPQTQEKQQRSKNLLLSGGSVLTTPRSKRRKNQLKRVCEVPVENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKPLAPQSATTAGGGGESETGEKALAKPALSPITPVAEEEAQPQEEKLESREGKEEDVMDDDEEEGEFGVCDMVIPDDFFESLDELGQFTGFDDAITAGDFFNDPFSALPIPSWLAAATAASGS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3293 409 Gene3D WRKY domain 197 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev06g3293 409 MobiDBLite consensus disorder prediction 268 352 - -
Aev06g3293 409 ProSiteProfiles WRKY domain profile. 208 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g3293 409 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 53 397 - -
Aev06g3293 409 MobiDBLite consensus disorder prediction 160 201 - -
Aev06g3293 409 MobiDBLite consensus disorder prediction 271 300 - -
Aev06g3293 409 SMART WRKY_cls 213 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g3293 409 MobiDBLite consensus disorder prediction 325 339 - -
Aev06g3293 409 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 53 397 IPR044810 GO:0003700
Aev06g3293 409 Pfam WRKY DNA -binding domain 215 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g3293 409 MobiDBLite consensus disorder prediction 160 194 - -
Aev06g3293 409 SUPERFAMILY WRKY DNA-binding domain 212 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3293 Aev-Chr6 34288532 34290500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3293 53 377 WRKY Transcription Factor Family AT4G01250 45.015 9.24e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev06g3293 WRKY 4.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3293 K13425 - gmx:100798084 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3293 06 34288532 34290500 Aev02g0247 02 1777896 1779672 PCT