Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3280 ATGGTGATGGAAGGAGAGAGAACTCGTCCCAAGGATGAAGAGGAGAAACCCAATGAGGTTGAGGAAATCAAGCGAGTCATTGAATCAGTGGCTCAATTTGGAGAGTACCGAAGGACACATAGGAAAGAATGTCACAACCTCATGAGACGCTTCAAGCACTTGTTGCCCCTCATGGAGGAGCTCCGGGACCTCAACGAGCCCGTGCCGGAGACCGGCACGGCCTGGTTGAGGAACCTGGGGGACGCTCTCTTGTTTGCCAAGGAAGTCTTGAGGGTTTGCAGCGAAGGAAGCAAAATTCACCTCGCAATGGAGAGCGAAGCAATTATGATAAAATTTCAGAATGCTTATGAAAAAATGAGTCAAGCATTTGATAGCGTGCCTTGCAAGGAATTGGGAATTTCTGATGAGGTTGAAGAACAGCTTGCGCTAATGCAGGCGCAACTTAGACTAGCGAAGAAGAGAACCGATACACAGGACATAGAACTTGTAATGGACTTGATGGTGGTGTTCTCCGACGACGATGAGAGAAACGCCGACTGCGTGATAATCGAGAGGCTAGCGAAGAAGTTGGAGCTTCAAACTTTTGAGGATCTTAAGATAGAAACTCTGGCTGTGAAGAAACTTGCTGCAGAAAGAAAAGGGCAACAAGGAGATAACACTCAGAAGATAATTGGACTTCTTAACAAGTTCAAAAGGATTGTTGGGATGGAAGAAACTAGTGTCCTTGGTGATCCTGCCATACCTAAGATTCTTGAGAAGAGCACATCTTTGGTCATTCCTCATGAGTTTCTTTGCCCAATTACATTGGAGATCATGACAGATCCTGTTATTATTGCAAGTGGACAGACATATGAAAGGGAAAGCATAAAGAAGTGGTTTGAATCAAACCATAACACTTGCCCAAAGACAAGGCAACTTCTTGATCACTTGCAAGTAGCACCAAATTGTGCCTTAAAGAACCTAATAGCAGAGTGGTGTGAGAACAACAACTTCAAATTACCAAAGAAATTCAAGTCCTTAGGCCAAGAAACCTGCCATATTGCAAACAAAGAGCAAATCCCTTCATTGGTTGAAAGCCTATCATCCATTCACCTAGAAGAGCAGAGAAAAGCCGTCGAGGAGATCCGAATGGTATCGAAAGAAAGCCCCGAAAACCGAATCTTGGTAGCAGAACATGGAGGAATACCACCCTTGGTACAAATCTTGTCCTACCCAGATTCAAAAATACAAGAGCATGCTGTGACAGCAATATTGAACTTGTCAATTGATGAAGGTAACAAGAGCCTAATATCAAAAGAAGGTGCAATTCCAGCTATAATAGAAGTTTTGGAAAATGGAAGCATAGTAGCTAAGGAAAATTCTGCAGCAGCATTGTTTAGTTTATCAATGCTTGATGAGAATAAGGAAATTATTGGTACATCAAATGGAATTCCACCTTTGGTTGAATTGTTGCAAAATGGGACAGTTAGAGGGAAAAAAGATGCTGTCACAGCACTTTTCAACTTGTCCTTAAGCCATTCAAATAAAGGCAGAGCAATTAGTGCTGGAATTGTGACACCTTTGCTTCAATTGCTTAAGGACACAAAGTTGAACATGATTGATGAGGCACTGTCCATTCTCTTGCTACTCGTCTCGAATCACGAGGCGAGGCAAGAGATTGCACAGTTATCATTCATAGAAGATCTTGTTGGGTTCATAAGTGAAGGAACACCAAAGAACAAGGAATGTGCAGCTTCTGTTCTGCTAGAGTTGTGTGTAAGTAACCACTCATTTGTTCTTGCAGCACTTCAGTTTGGTGTTTATGAGCATTTGATTGAGATGAAGGAAAGTGGAACAAATAGAGCACAGAGGAAAGCAAATTCTATCTTAGAGCTCATAAGTAGGAATGAGCAAATTTGA 1899 0.4234 MVMEGERTRPKDEEEKPNEVEEIKRVIESVAQFGEYRRTHRKECHNLMRRFKHLLPLMEELRDLNEPVPETGTAWLRNLGDALLFAKEVLRVCSEGSKIHLAMESEAIMIKFQNAYEKMSQAFDSVPCKELGISDEVEEQLALMQAQLRLAKKRTDTQDIELVMDLMVVFSDDDERNADCVIIERLAKKLELQTFEDLKIETLAVKKLAAERKGQQGDNTQKIIGLLNKFKRIVGMEETSVLGDPAIPKILEKSTSLVIPHEFLCPITLEIMTDPVIIASGQTYERESIKKWFESNHNTCPKTRQLLDHLQVAPNCALKNLIAEWCENNNFKLPKKFKSLGQETCHIANKEQIPSLVESLSSIHLEEQRKAVEEIRMVSKESPENRILVAEHGGIPPLVQILSYPDSKIQEHAVTAILNLSIDEGNKSLISKEGAIPAIIEVLENGSIVAKENSAAALFSLSMLDENKEIIGTSNGIPPLVELLQNGTVRGKKDAVTALFNLSLSHSNKGRAISAGIVTPLLQLLKDTKLNMIDEALSILLLLVSNHEARQEIAQLSFIEDLVGFISEGTPKNKECAASVLLELCVSNHSFVLAALQFGVYEHLIEMKESGTNRAQRKANSILELISRNEQI* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3280 632 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 393 435 IPR000225 GO:0005515
Aev06g3280 632 SUPERFAMILY RING/U-box 258 334 - -
Aev06g3280 632 PANTHER U BOX DOMAIN-CONTAINING 14 629 - -
Aev06g3280 632 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 475 517 IPR000225 GO:0005515
Aev06g3280 632 Coils Coil 134 154 - -
Aev06g3280 632 SMART Ubox_2 262 325 IPR003613 GO:0004842|GO:0016567
Aev06g3280 632 CDD RING-Ubox_PUB 263 305 IPR045210 -
Aev06g3280 632 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 15 14 629 - -
Aev06g3280 632 ProSiteProfiles U-box domain profile. 258 332 IPR003613 GO:0004842|GO:0016567
Aev06g3280 632 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 434 476 IPR000225 GO:0005515
Aev06g3280 632 SMART arm_5 505 545 IPR000225 GO:0005515
Aev06g3280 632 SMART arm_5 546 586 IPR000225 GO:0005515
Aev06g3280 632 SMART arm_5 464 504 IPR000225 GO:0005515
Aev06g3280 632 SMART arm_5 382 422 IPR000225 GO:0005515
Aev06g3280 632 SMART arm_5 423 463 IPR000225 GO:0005515
Aev06g3280 632 Pfam U-box domain 259 329 IPR003613 GO:0004842|GO:0016567
Aev06g3280 632 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 259 332 IPR013083 -
Aev06g3280 632 SUPERFAMILY ARM repeat 348 630 IPR016024 -
Aev06g3280 632 Gene3D - 17 128 IPR036537 GO:0007166
Aev06g3280 632 Pfam Armadillo/beta-catenin-like repeat 465 503 IPR000225 GO:0005515
Aev06g3280 632 Pfam Armadillo/beta-catenin-like repeat 382 421 IPR000225 GO:0005515
Aev06g3280 632 Gene3D - 333 631 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3280 Aev-Chr6 34146984 34149837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3280 20 632 U-box Gene Family AT5G42340 61.011 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3280 - - gmx:100777362 951.044