Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3271 ATGGGCTTCCCCGTAGGCTACACCGAAGTCCTCGTCCCAACCACCTTCCTCCGCCTCCTCACCTTCCTCGCCACTCTCCGAAACCTCGTCCTCTCCCTCTTCCACCTCCTCGGCCTCTCCGAACTCCTCGACACAACCGCCACCACCATATCCGCCACCACCGACCCCTCCCCTTTCTTATGGGCCCAGGCCCAACTCCTCGGGCCCAATTTCAATTCCACCACCAACACCAACACCAACAACAACCCCTCCCTCTCCGCAATCCTAATCCGCGAATTCCTTCCCGTCATCAAATTCCGCGACCTCGCCGGCGCCGGCGAAGGACACTCGTCGTCTCCGGCGGATAACTCCTGTGCGGTTTGCCTGAATGAATTTTCCGGCGAGGATGAGATCAGGTGTATGGCGAACTGTAGACACGTTTTCCACCGGGGATGTGTGGACCGTTGGATGGATCATGATCAGAGGACGTGTCCTTTGTGTAGGACACCGTTCGTGCCAGATCATAAGGTTCAAGAGTATAATCAACGGCTCTGGGAAGCTTCTGGTGTATCTGAATTCTATGCGGAGTAG 570 0.5667 MGFPVGYTEVLVPTTFLRLLTFLATLRNLVLSLFHLLGLSELLDTTATTISATTDPSPFLWAQAQLLGPNFNSTTNTNTNNNPSLSAILIREFLPVIKFRDLAGAGEGHSSSPADNSCAVCLNEFSGEDEIRCMANCRHVFHRGCVDRWMDHDQRTCPLCRTPFVPDHKVQEYNQRLWEASGVSEFYAE* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3271 189 Pfam Ring finger domain 116 161 IPR001841 -
Aev06g3271 189 PANTHER RING ZINC FINGER PROTEIN-RELATED 74 187 - -
Aev06g3271 189 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 51 - -
Aev06g3271 189 ProSiteProfiles Zinc finger RING-type profile. 118 161 IPR001841 -
Aev06g3271 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 166 IPR013083 -
Aev06g3271 189 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 74 187 - -
Aev06g3271 189 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 51 - -
Aev06g3271 189 SMART ring_2 118 160 IPR001841 -
Aev06g3271 189 SUPERFAMILY RING/U-box 117 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3271 Aev-Chr6 34053628 34054197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3271 1 184 C3H Transcription Factor Family AT1G63840 43.548 8.04e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3271 K16281 - gmx:100813224 186.422