Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3269 ATGGGAGGTTGCTGTTGTTCTGCCAGAAAACCTCATCTGCATGGAACACCAGTGTATTACTATTGCCCACCAACTTTGGAAGAGCGCGAATCCTTAACATCTAATGATGGTACGGCTACCTCACTCACTGCCGGATTGCTGTTTGGTTTAAACCTAGATGCATCCACACCTGATACTTTTCAGCCCCCTCCTGCACCTCTTCCTTATGATACGATCTTAGGCGGAACTGCATCCACAGATTCTGAGTCTGGCAGGGAAACAGTTAGTGGGAGTAGTTTCGAAACTTTAATTACTCGTGAAGATCTTGAAGAATCAGATTGTAAAGTGCAAATCAATTCTGCACCTATATCTCCAAGGAAGGAAGAACTATCAAAATCAAATCAGAGTCAAATATTAGTGACAGAAGAAGAGGATGTTTGTCCAATTTGTCTTGAAGAATATGATGTTGAGAATCCAAAAAATCTGACAAAATGTGAACACCACTTTCACCTATCTTGCATTCTTGAGTGGATGGAAAGGAGTGACTCCTGTCCTATATGTGATCAGGAGATGATATTTTGA 561 0.4135 MGGCCCSARKPHLHGTPVYYYCPPTLEERESLTSNDGTATSLTAGLLFGLNLDASTPDTFQPPPAPLPYDTILGGTASTDSESGRETVSGSSFETLITREDLEESDCKVQINSAPISPRKEELSKSNQSQILVTEEEDVCPICLEEYDVENPKNLTKCEHHFHLSCILEWMERSDSCPICDQEMIF* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3269 186 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED 1 186 - -
Aev06g3269 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 185 IPR013083 -
Aev06g3269 186 SUPERFAMILY RING/U-box 134 184 - -
Aev06g3269 186 MobiDBLite consensus disorder prediction 74 91 - -
Aev06g3269 186 SMART ring_2 140 180 IPR001841 -
Aev06g3269 186 Pfam Ring finger domain 139 180 IPR001841 -
Aev06g3269 186 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 186 - -
Aev06g3269 186 MobiDBLite consensus disorder prediction 72 91 - -
Aev06g3269 186 ProSiteProfiles Zinc finger RING-type profile. 140 181 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3269 Aev-Chr6 34034190 34035697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3269 1 186 C3H Transcription Factor Family AT4G00335 60.215 6.11e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3269 - - gmx:100792561 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3269 06 34034190 34035697 Aev02g0278 02 2014212 2015349 PCT