Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev06g3269 | ATGGGAGGTTGCTGTTGTTCTGCCAGAAAACCTCATCTGCATGGAACACCAGTGTATTACTATTGCCCACCAACTTTGGAAGAGCGCGAATCCTTAACATCTAATGATGGTACGGCTACCTCACTCACTGCCGGATTGCTGTTTGGTTTAAACCTAGATGCATCCACACCTGATACTTTTCAGCCCCCTCCTGCACCTCTTCCTTATGATACGATCTTAGGCGGAACTGCATCCACAGATTCTGAGTCTGGCAGGGAAACAGTTAGTGGGAGTAGTTTCGAAACTTTAATTACTCGTGAAGATCTTGAAGAATCAGATTGTAAAGTGCAAATCAATTCTGCACCTATATCTCCAAGGAAGGAAGAACTATCAAAATCAAATCAGAGTCAAATATTAGTGACAGAAGAAGAGGATGTTTGTCCAATTTGTCTTGAAGAATATGATGTTGAGAATCCAAAAAATCTGACAAAATGTGAACACCACTTTCACCTATCTTGCATTCTTGAGTGGATGGAAAGGAGTGACTCCTGTCCTATATGTGATCAGGAGATGATATTTTGA | 561 | 0.4135 | MGGCCCSARKPHLHGTPVYYYCPPTLEERESLTSNDGTATSLTAGLLFGLNLDASTPDTFQPPPAPLPYDTILGGTASTDSESGRETVSGSSFETLITREDLEESDCKVQINSAPISPRKEELSKSNQSQILVTEEEDVCPICLEEYDVENPKNLTKCEHHFHLSCILEWMERSDSCPICDQEMIF* | 187 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev06g3269 | 186 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED | 1 | 186 | - | - | |
Aev06g3269 | 186 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 116 | 185 | IPR013083 | - | |
Aev06g3269 | 186 | SUPERFAMILY | RING/U-box | 134 | 184 | - | - | |
Aev06g3269 | 186 | MobiDBLite | consensus disorder prediction | 74 | 91 | - | - | |
Aev06g3269 | 186 | SMART | ring_2 | 140 | 180 | IPR001841 | - | |
Aev06g3269 | 186 | Pfam | Ring finger domain | 139 | 180 | IPR001841 | - | |
Aev06g3269 | 186 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 1 | 186 | - | - | |
Aev06g3269 | 186 | MobiDBLite | consensus disorder prediction | 72 | 91 | - | - | |
Aev06g3269 | 186 | ProSiteProfiles | Zinc finger RING-type profile. | 140 | 181 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev06g3269 | Aev-Chr6 | 34034190 | 34035697 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev06g3269 | 1 | 186 | C3H Transcription Factor Family | AT4G00335 | 60.215 | 6.11e-76 | 224 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev06g3269 | - | - | gmx:100792561 | 342.043 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev06g3269 | 06 | 34034190 | 34035697 | Aev02g0278 | 02 | 2014212 | 2015349 | PCT |