Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3267 ATGCTTAGTAATGGGGAACCTGTGGACTTGTATAAGCTGTTCATGGTGGTGAAGGAGAAAGGTGGCTATGATGCTGTTTGTAAGAACAAGTTGTGGGATTTGGTGGGGGAAGAATATGGGTCGGGTGTAAAGGTTGGTTCCTCCATTGAAGTTGTTTACAGTAAGCACTTGAGTACTCTAGAGAGTTGTCTGAAGAATGTTGCTGATAGCGACTTCCCCGAATGTGGTTTAGTGGATGATAGAGTTAATTTTAGTAAGAAGTTGATGGAGGTGCAAGCTGAATCCGAATCCATGTTGGATGGTTATGATGAGGAAGGTTCCGGGGACGAAATCAAGAGGGTATGCGACTACCTAGATGGGAGGAAGTTGTGTGGAACTAATAGAGTGAGGGGCATTAATCCGGAGCTCAATGTGACCAAGAAAGTTCAGAATGGTGGAGGTGTTGATTTGACTGTGCAGGACCGTAATATTGGAAACTTTTGTAGCCATAACTATGCAATGGATATTATGGACCATTTGAATGAAAATGAAACATCTGCGAATGATATATCTGACGCATTGAACAGCATGCCCGGATTATCAGATGGTGGCAACAGTGGTGATAATGGTGATGGCGACGGTCTTGACAAAGAGAGTTCTGGCCGAAAGAGGAAAAGAGAATCTTCATCGGAAATGCTAAGCTGGGTTACTGGTATTGCTTTGGATCCTTGTGATCCTGCAGTTGGTTCGATGCCTGAAAAATCAAAGTGGAAGTCTCACGGTAGTGAGGTGATCTGGAAGCAGGTTTTATTGTTTCGGGAAGCTCGACTTCTGAAAAGAGGTTCTGAAAGTGAACAGTCTAGCTGGCAGGGCCAGAGGATGCATCCATGCATGTATGATGATCCTCGTGAGCCGAACTACAACCTTAGAGAGAGGTTGAAATGTGACAAGAAGCTTTTACTGGGGAAGTCCACATCTGGTCAAGTCTCTGTGGATTCATCTGAGGGAAAAGAGGAAGGTTCGGAGAAAATAGATCGGGTGCCCATCCCTATTGGGCCATCCCGTCAAGCCAAAGTTCCAGAATGGACTGGCAAGACTGTTGAGAGTGACTCTAAGTGGTTGGGAAGCGTAGTATGGCCAGCAGAAAATGGAAATCCTGCATTTATTGAAGATCTGGTTGGAGCAGGAAGAAAAGATTCGTGTGACTGCCAAGAAAAAGGTTCTGTCGAGTGTGTCCGACTCCACATTGCTGAGGAAAGGTCTAAAGTTAAGTTGGATCTAGGTGTGGCTTTTTACCTTTGGAATTTACACAAGGTAGGTGAGGATGTTAGTCGGTTGTGGACAGAAGCCGAAGAGAATAAGTTCAAGGATGTGGTGAAGTCAAACCCTCTTTCACTTGAGAAATGTTTCTGGGATGAACTCTTTACAACATTTCGTAGGAAGAGCAGGGAAGATTTAGTGAGTTACTACTTCAACGTCTTTCTTTTGCGGCGCAGGGGATACCAGAACAGGAATACTCCGGATGACATTGACAGCGATGATGATGAATCAGAATACGGACCATTGAAGAATGTTTTCGGTAATTCACGCAGCTTCGTCTTATTGTCGCCCAAAAAGCCTCCGATAAAGGGACCATAG 1617 0.4471 MLSNGEPVDLYKLFMVVKEKGGYDAVCKNKLWDLVGEEYGSGVKVGSSIEVVYSKHLSTLESCLKNVADSDFPECGLVDDRVNFSKKLMEVQAESESMLDGYDEEGSGDEIKRVCDYLDGRKLCGTNRVRGINPELNVTKKVQNGGGVDLTVQDRNIGNFCSHNYAMDIMDHLNENETSANDISDALNSMPGLSDGGNSGDNGDGDGLDKESSGRKRKRESSSEMLSWVTGIALDPCDPAVGSMPEKSKWKSHGSEVIWKQVLLFREARLLKRGSESEQSSWQGQRMHPCMYDDPREPNYNLRERLKCDKKLLLGKSTSGQVSVDSSEGKEEGSEKIDRVPIPIGPSRQAKVPEWTGKTVESDSKWLGSVVWPAENGNPAFIEDLVGAGRKDSCDCQEKGSVECVRLHIAEERSKVKLDLGVAFYLWNLHKVGEDVSRLWTEAEENKFKDVVKSNPLSLEKCFWDELFTTFRRKSREDLVSYYFNVFLLRRRGYQNRNTPDDIDSDDDESEYGPLKNVFGNSRSFVLLSPKKPPIKGP* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3267 538 Gene3D - 1 71 IPR036431 GO:0003677
Aev06g3267 538 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 1 533 - -
Aev06g3267 538 SUPERFAMILY ARID-like 4 73 IPR036431 GO:0003677
Aev06g3267 538 ProSiteProfiles ELM2 domain profile. 340 443 IPR000949 -
Aev06g3267 538 MobiDBLite consensus disorder prediction 182 196 - -
Aev06g3267 538 SMART bright_3 1 66 IPR001606 GO:0003677
Aev06g3267 538 MobiDBLite consensus disorder prediction 182 225 - -
Aev06g3267 538 MobiDBLite consensus disorder prediction 319 343 - -
Aev06g3267 538 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Aev06g3267 538 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 533 - -
Aev06g3267 538 CDD ARID 4 61 - -
Aev06g3267 538 SMART ELM2_2 342 393 IPR000949 -
Aev06g3267 538 MobiDBLite consensus disorder prediction 204 223 - -
Aev06g3267 538 Pfam ARID/BRIGHT DNA binding domain 4 59 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3267 Aev-Chr6 34014123 34016504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3267 5 78 ARID Transcription Factor Family AT1G20910 33.766 5.65e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Aev06g3267 ARID 9.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3267 - - adu:107485899 704.901