Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3233 ATGGATCGCGGGGACCAAATGGCGTTATCAGGATCTGCATCTTACTATATGCAACAGAGAGGAATGGGTGGTTCTGGAGCACAACCTGAGTTTTCACCCGGTATTCGATCACTGTCTAATCCCAACTTACAATTTCAATCCAACATTGGTGGTGGTGGTACCATTGGATCCACTTTGCCGTTAGAATCTTCAGCAATTTCATCTCATGGTGTCAATGTGGGTGCTCCTCCTGGGGCACCACCCGGTGAGCCTGTCAAAAGGAAGAGAGGAAGGCCGAGGAAATATGGGACTGATGGAACTGTGTTGGCACTCACACCGACATCATCTAGTCATCCTGGAGCATTGACACAAGGCCAGAAACGGGGCAGAGGGCGCCCCCCTGGGACCGGGAAGAAACAGCGATTAGCATCGCTTGGTGAAATGATGTCTGGTTCGGCTGGGATGGGATTCACTCCTCATGTCATCAACATTGCAAGTGGAGAAGATATTGCAACAAAAATTATGACATTTGCTCAGCAGGGGCCTAGAGCTGTATTCGTTTTGTCAGCCAATGGTGCTGTTTCGACTGTCACACTTAGTCAGTCTTCAACTTCAGGTGGCTCTGTCACATATGAGGGGCGTTTCGAGATATTGTGCCTATCGGGCTCTTTCTTGCTTTCCGATAATGGTGGCTCACGCAATCGAACTGGCGGTCTAAGTGTTTCCCTTGCTAGTCCTGATGGTCGTGTCATCGGTGGAGGAGTTGGAGGTGTCCTCATTGCATCAAGTCCTGTTCAGGTGATAGTTGGGAGCTTTATATGGGGTGGATCGAGGATAAAGAACAAGAAGAAGGAAAGCTCGCAAGGCGCAGAAGCTCCGGTGGAGTCTGATCATCAGGCAGTTCATAATCAAGTCGCAATGAATAGCATCTCCCCAAATCAAAATCTTAATCCAGCCTCATCTCTGAGTCCTTGGCCAGCGTCGCGTCAGTTGGACATGCGCAATTCCCATGTCGACATCGATTTAATGCGTGGGTGA 1017 0.4946 MDRGDQMALSGSASYYMQQRGMGGSGAQPEFSPGIRSLSNPNLQFQSNIGGGGTIGSTLPLESSAISSHGVNVGAPPGAPPGEPVKRKRGRPRKYGTDGTVLALTPTSSSHPGALTQGQKRGRGRPPGTGKKQRLASLGEMMSGSAGMGFTPHVINIASGEDIATKIMTFAQQGPRAVFVLSANGAVSTVTLSQSSTSGGSVTYEGRFEILCLSGSFLLSDNGGSRNRTGGLSVSLASPDGRVIGGGVGGVLIASSPVQVIVGSFIWGGSRIKNKKKESSQGAEAPVESDHQAVHNQVAMNSISPNQNLNPASSLSPWPASRQLDMRNSHVDIDLMRG* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3233 338 CDD DUF296 151 265 IPR005175 -
Aev06g3233 338 ProSiteProfiles PPC domain profile profile. 146 288 IPR005175 -
Aev06g3233 338 SUPERFAMILY AF0104/ALDC/Ptd012-like 150 267 - -
Aev06g3233 338 Pfam Plants and Prokaryotes Conserved (PCC) domain 152 265 IPR005175 -
Aev06g3233 338 MobiDBLite consensus disorder prediction 32 70 - -
Aev06g3233 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 30 313 IPR039605 GO:0003680
Aev06g3233 338 MobiDBLite consensus disorder prediction 1 134 - -
Aev06g3233 338 MobiDBLite consensus disorder prediction 303 323 - -
Aev06g3233 338 SMART AT_hook_2 120 132 IPR017956 GO:0003677
Aev06g3233 338 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Aev06g3233 338 MobiDBLite consensus disorder prediction 101 116 - -
Aev06g3233 338 Gene3D - 152 293 - -
Aev06g3233 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 30 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3233 Aev-Chr6 33725664 33728572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3233 1 265 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 55.036 3.84e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3233 - - gmx:100814615 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3233 06 33725664 33728572 Aev06g3233 06 33725664 33728572 ECH
Aev06g3233 06 33725664 33728572 Aev02g0308 02 2288337 2291985 PCT