Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3227 ATGCTACATAGATGTTTATGCTTTCATGGTTCAAAGGATGAGAGTTCATCTAAGAAAACTTATCCAATTGTAATACAAGAGCTATCCAATCAATTTTCCTTAGCAGATATTCGAAAGGCGACCAACAACTTCGATGAGAAACTAATACTTGGAAAAGGAGACTATAGTATGGTATACAAAGGGTTCCTTGAACACAATGGTATAGCTGATTATCCAGTGGCAGTAAAGCGGATGGCTCGCTTCAGCGAGTTCAAGAAGGAAATTGAGTTGTTATGCCAGATTCGTCACCCGAATCTGATCTCTCTTATCGGATTCTGCAACCACAGACATGAGAAGCTTATTGTGTATGAGTACACACCTATTGGATCCCTCCATAATTATATTTACAATAAGGAAAATGAACCATTGTTATGGAAGAAAAGGCTAGAGATATGCATTGGAGCAGCGTGTGGACTACACTACCTTCACGCAGGTGCCAAGCGCTCTATTTTTCATCGTGACATAAAGCCTAATAACATTCTTTTGGATAAGGATATGGTTCCCAAACTTTGCTATTTCAGGCTTTCGTTACAGGGGCCGCCTTATACATCAGAGCCTAAACCAATTCCAGCAGATGATGTTGATGAGTACATGTTCATGAACAAGGCCAACATGTTAGCAAATCAACAATGGAGGAAGAGGACAAGTGAACATTCAGAAAATTTCTTTGATGACCCAACATTGAATATGATACTGATTGCTCTAGGACGGTTCGCTGTTGAGGAGATAATTGATCCGATTCTTATCGGAAAGATTGCGCCGGAGTGTTGGGAAGTATTCATGGATATCACACAGAGATGCTTGAAATATGAACCAAATGAAAGACCAACAATGGGTGAAGTGGAAGTGTTGCTTGAACATGCTCTTTCACTGCAAGAACAAGCAGATATCAGAAAGATTGATGATGGTGATTATACCTTATCAACCACTACCTATATTGATAAGGAGTCAGCCATTTTTATAGATCATAGTGAAGCAAATAACATGTAA 1029 0.3926 MLHRCLCFHGSKDESSSKKTYPIVIQELSNQFSLADIRKATNNFDEKLILGKGDYSMVYKGFLEHNGIADYPVAVKRMARFSEFKKEIELLCQIRHPNLISLIGFCNHRHEKLIVYEYTPIGSLHNYIYNKENEPLLWKKRLEICIGAACGLHYLHAGAKRSIFHRDIKPNNILLDKDMVPKLCYFRLSLQGPPYTSEPKPIPADDVDEYMFMNKANMLANQQWRKRTSEHSENFFDDPTLNMILIALGRFAVEEIIDPILIGKIAPECWEVFMDITQRCLKYEPNERPTMGEVEVLLEHALSLQEQADIRKIDDGDYTLSTTTYIDKESAIFIDHSEANNM* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3227 342 PANTHER OS07G0166700 PROTEIN 15 207 IPR045272 GO:0004714|GO:0006468
Aev06g3227 342 ProSiteProfiles Protein kinase domain profile. 44 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3227 342 SUPERFAMILY Protein kinase-like (PK-like) 21 294 IPR011009 -
Aev06g3227 342 SMART serkin_6 44 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3227 342 PANTHER OS07G0166700 PROTEIN 245 321 IPR045272 GO:0004714|GO:0006468
Aev06g3227 342 PANTHER TYROSINE KINASE FAMILY PROTEIN 245 321 - -
Aev06g3227 342 PANTHER TYROSINE KINASE FAMILY PROTEIN 15 207 - -
Aev06g3227 342 Gene3D Transferase(Phosphotransferase) domain 1 215 325 - -
Aev06g3227 342 Gene3D Transferase(Phosphotransferase) domain 1 120 213 - -
Aev06g3227 342 Gene3D Phosphorylase Kinase; domain 1 7 118 - -
Aev06g3227 342 ProSitePatterns Protein kinases ATP-binding region signature. 50 76 IPR017441 GO:0005524
Aev06g3227 342 Pfam Protein tyrosine and serine/threonine kinase 49 190 IPR001245 GO:0004672|GO:0006468
Aev06g3227 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3227 Aev-Chr6 33689750 33691395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3227 6 309 Receptor kinase-like Gene Family AT3G51550 36.937 6.69e-58 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aev06g3227 PK_Tyr_Ser-Thr 2.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3227 - - adu:107486597 374.4