Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3226 ATGGGAAGGACACCTTGTTGTGACAAGAAGGGTTTGAAGAAAGGACCATGGACAGCAGAAGAAGATGAAATTCTTTGTAACTATATCAAGAAAAATGGTGGCCATGGTAGCTGGCGATCTCTCCCTAAGATCACAGGGCTTCTTCGTTGTGGTAAAAGTTGCAGGCTTAGGTGGACTAATTATCTCAGACCTGACATAAAACGTGGTCCCTTTACTCCTGACGAAGAAAAACTTGTTATACAGCTTCATGGCATCCTTGGAAATAGGTGGGCTGCAATTGCATCTCAATTACCGGGAAGAACCGACAATGAGATAAAAAACTTATGGAACACGCACTTGAAGAAGCGCCTCAAAAACATGGGAATCGATCCCAAAACGCACGAGCCGATGGCTTCTCCACATTACCCCGTCAACAAGGCACACGGGTCGTCCGTCTCGACGCGCCACATGGCTCAATGGGAGAGTGCTAGACTCGAAGCCGAAGCTAGGCTCTCAAATGAGTCATCACTATTCAACAACAACAACAACCAAAGTGCTGATGCTGATTACTTCCTTCGCATATGGAACTCGGAGGTCGGCGAAGCGTTTCGCAATGTTAACAAATCAGAAAACAACAAAATTAGGTCCTGCCGGAGTCCAATTTCGGCAGGATCGTCTTCCAACAAGTGCGAATCGGCCTCTGCTGTGACAGCAGAGTTGGCCTCAAACCAAAAAACAGGGGAATCAAATGGTGGAAGCAATATTAATAATGTGAAAGAAGAATTGTTGGAGTGTGGTGATGAAGGTATTGTGGTTCATAATAATGGTTCTGATTCATCATGCTCTAATGACTTGGAAGATTCATCTGATGATACTGCATTGCAGCTATTGTTAGATTTTCCTATAAACAATGACATGAGCTTCTTAGAAGCAAATTATCCTTTTGTTTGTCCAATTTAA 939 0.4366 MGRTPCCDKKGLKKGPWTAEEDEILCNYIKKNGGHGSWRSLPKITGLLRCGKSCRLRWTNYLRPDIKRGPFTPDEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLKNMGIDPKTHEPMASPHYPVNKAHGSSVSTRHMAQWESARLEAEARLSNESSLFNNNNNQSADADYFLRIWNSEVGEAFRNVNKSENNKIRSCRSPISAGSSSNKCESASAVTAELASNQKTGESNGGSNINNVKEELLECGDEGIVVHNNGSDSSCSNDLEDSSDDTALQLLLDFPINNDMSFLEANYPFVCPI* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3226 312 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aev06g3226 312 Gene3D - 11 68 - -
Aev06g3226 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Aev06g3226 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Aev06g3226 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 306 - -
Aev06g3226 312 CDD SANT 16 62 IPR001005 -
Aev06g3226 312 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Aev06g3226 312 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Aev06g3226 312 Gene3D - 70 136 - -
Aev06g3226 312 PANTHER PROTEIN ODORANT1-LIKE 1 306 - -
Aev06g3226 312 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Aev06g3226 312 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Aev06g3226 312 CDD SANT 70 113 IPR001005 -
Aev06g3226 312 SMART sant 13 64 IPR001005 -
Aev06g3226 312 SMART sant 67 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3226 Aev-Chr6 33681222 33683990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3226 1 305 MYB Transcription Factor Family AT3G61250 61.935 5.28e-127 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g3226 Myb_DNA-binding 3.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3226 K09422 - gmx:100816569 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3226 06 33681222 33683990 Aev02g0315 02 2334733 2336965 PCT