Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3202 ATGGGTGTTGGTGGCAATTTCTGGGACCTTCTGAAGCCCTATGCACGGAACGAAGGTTTTGATTTCTTGAGGAATAAGCGAGTTGCTGTGGACCTCTCTTACTGGATTGTTCAGCACGAGACTGCCATTAAGGCCCATCATGTTAAGAAACCTCACCTGAGACTCACCTTCTTCCGCACCATCAATCTCTTCTCCAAGTTCGGAGCATTTCCAGTGTTTATTGTTGATGGGACTCCGTCGCCATTGAAATCACAGGCCAGGATTGCAAGATTTTTCCGGTCTTCTGGCATTGAATTGGCTAGCTTACCAGTGCCTGGAGAAGGTGTTTCAGCTGAGAGGAACCGTTCATTTTCAAATTGTGTTCAACAATGTGTGGAACTTGTTGAGCTACTTGGAATGCCTGTATTAAAGGCTAAAGGAGAGGCTGAAGCACTCTGTGCCCAATTAAACTATGAAGGTCATGTAGATGCTTGCATCACTGGTGACAGTGATGCATTCCTCTTTGGGGCCAAATGCATCATAAAATGTTTCCGCCCCAATTCCAAAGAACCATTCGAGTGCTATAATATGTTAGATATTGAAGCTGGCCTTGAGTTGAAGAGGAAACACTTAATAGCTATCTCTCTTTTGGTTGGGAATGATCATGATATGAATGGTGTTCGAGGGATTGGGCTTGATACTGCTCTTCATTTTGCTCAAGCTTTTAGTGAAGATGATATATTAAATAGATTACATGAGATTGGAAAAGGGAACATTTCAGAAGTTCCCATCAGCATTAAATCTGAGGACAATATGGATATGGATGGGAACTCCCCAAATACAAAACAACCTCACTGCTCATTCTGTGGGCATCCTGGCAACAAGAGGGACCATATGAAGCTTTCATGTGAATATTGCATCACAAATGACGATGAAGGTTGCCTAAGAAAGCCAGAAGGTTTTAAGTGTGATTGCTTCTCCTGTGGTATGAATAGGAAACACAAGGGGCAGAAAAGGCTGGAAAACTGGTACTCAAGAGTTTGTGAGAAGATTGCGAAGGAGCCAAATTTTCCAAAGGATGAAATCATTGATATGTATCTATGCAGTGACAATGGTTACTTCTCTGCAAATGATGGTCCTCACATTGCATGGGAAAAACCCAATATTGAGATGCTGATTGACTTTTTAATCTTCCATCAGAACTGGGATCCAGCCTACATTCGACGGCTGATGTTTCCGATGATGTCCACCATCTTTTTGCGAGATACGGCTTCAAGTACAGGAGAAAAATTGTTATTTGGGCAATATGAGTTTGATTCTTTACAACGAGTGAAGATAAGATATGGGTATAAGTTTTATGTGGTCACGTGGAAACATATGGCCAATGTTGCCTATTCAATTCCATCTGATGAGTCTAGCATGGATGAAGATGTTAGAGAGCTTGAGGAAACAGTGGATCTACTGGATGACTGTGATGTTCCAGAGATTGATGTGAATGATGGTTTTCTATTGACAGATGAAAATATGGACCTTGTAGGGGCTGCTTTTCCCGAAGAAGTTAAGAGGTTTTGGCATGAACAGGAACTGAAGGATTCAAAAAGAAGAAAAAGTTCAACCCCAAGATCACAACAAAATGAAGTATCAGCATCAGCAAACTCAAAAGGCATCCAAATGAACATCACAGAGTTCTTCCCTTCAACCAAAGTGAAAAACCAGCTAAAACAAGGTGAAGAGTCATCCAAGAACCCTGATAGCCAAGGCAGCCAAGCTGGAGCCGGATCCTCGAAAACGAAGAGGAAAGAGTCGAGCTCTAACCTCCCAAAATCTGTCAGACGCCGCCTTTTATTCGATTAG 1833 0.4223 MGVGGNFWDLLKPYARNEGFDFLRNKRVAVDLSYWIVQHETAIKAHHVKKPHLRLTFFRTINLFSKFGAFPVFIVDGTPSPLKSQARIARFFRSSGIELASLPVPGEGVSAERNRSFSNCVQQCVELVELLGMPVLKAKGEAEALCAQLNYEGHVDACITGDSDAFLFGAKCIIKCFRPNSKEPFECYNMLDIEAGLELKRKHLIAISLLVGNDHDMNGVRGIGLDTALHFAQAFSEDDILNRLHEIGKGNISEVPISIKSEDNMDMDGNSPNTKQPHCSFCGHPGNKRDHMKLSCEYCITNDDEGCLRKPEGFKCDCFSCGMNRKHKGQKRLENWYSRVCEKIAKEPNFPKDEIIDMYLCSDNGYFSANDGPHIAWEKPNIEMLIDFLIFHQNWDPAYIRRLMFPMMSTIFLRDTASSTGEKLLFGQYEFDSLQRVKIRYGYKFYVVTWKHMANVAYSIPSDESSMDEDVRELEETVDLLDDCDVPEIDVNDGFLLTDENMDLVGAAFPEEVKRFWHEQELKDSKRRKSSTPRSQQNEVSASANSKGIQMNITEFFPSTKVKNQLKQGEESSKNPDSQGSQAGAGSSKTKRKESSSNLPKSVRRRLLFD* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3202 610 Pfam XPG N-terminal domain 1 90 IPR006085 GO:0004518
Aev06g3202 610 SMART xpgineu 129 199 IPR006086 GO:0004518
Aev06g3202 610 CDD PIN_GEN1 2 203 - -
Aev06g3202 610 Gene3D - 3 198 - -
Aev06g3202 610 SUPERFAMILY PIN domain-like 6 214 IPR029060 -
Aev06g3202 610 MobiDBLite consensus disorder prediction 534 593 - -
Aev06g3202 610 MobiDBLite consensus disorder prediction 520 610 - -
Aev06g3202 610 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 595 IPR006084 -
Aev06g3202 610 PANTHER FLAP ENDONUCLEASE GEN-LIKE 1 1 595 - -
Aev06g3202 610 Gene3D - 199 260 - -
Aev06g3202 610 Pfam XPG I-region 132 214 IPR006086 GO:0004518
Aev06g3202 610 SMART xpgn3 1 97 IPR006085 GO:0004518
Aev06g3202 610 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 199 414 IPR036279 -
Aev06g3202 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 71 90 IPR006084 -
Aev06g3202 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 128 145 IPR006084 -
Aev06g3202 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Aev06g3202 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 204 219 IPR006084 -
Aev06g3202 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 149 169 IPR006084 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3202 16 337 Core DNA Replication Machinery Family AT5G26680 26.836 5.13e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3202 K15338 - gmx:100791251 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3202 06 33502374 33506075 Aev06g3202 06 33502374 33506075 ECH