Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3192 ATGGCTCTTCCAATTCAAGAAATTCCAAATAATCGATCTTTGAACAATGACAAAGTATACATAACCATTGTTTCTGCCTCAGAGTCAACAAATACTCCAAAACTTCTCCGATTGAATTTGCCTATATATCGTACCCTTTTAATCAATGAAGCTATTTGTGAGGATTTGATGAAGACAATACTTGGGAAGATCATAGAAATACCACAAAGTTTTCTCAATGTCCAAGATTGTGACATGGTACACAAGGTTTCAAGGATGCTATGTGACTCAATAAAGTTGCATCAAAGTATGAAGATAGATTACTTTTGTGTGTTTATTATGGTGTTCAATGATTCTTGTTGGTACAATGTTTTGAAATGCTCACATTTCTTTTTGTGTGGTGATGAACAAATTCCATCAAGTGAGGCTGTGAGAAGTTTGGCTTGTGGGAGTGGTGTGAGTTCTTTTCCTTCAAAGGAAAATGCAAAAGAGTTGTTGATGAAGGATCAAGATCAAGAAGATGGTGAAGAGGATCAATGTGCCATTTGCTTACAAGGGTTCATCTCTGAAATTGAAGTGACTAAGTTGCCTTGTTCTCATGTTTATCACTTTGATTGTATTTTGAGATGGCTTAGGCATAAGGATACATGCCCTTTGTGTCGTAATGTTGTAGAGTTTAGGGTTTAA 666 0.3589 MALPIQEIPNNRSLNNDKVYITIVSASESTNTPKLLRLNLPIYRTLLINEAICEDLMKTILGKIIEIPQSFLNVQDCDMVHKVSRMLCDSIKLHQSMKIDYFCVFIMVFNDSCWYNVLKCSHFFLCGDEQIPSSEAVRSLACGSGVSSFPSKENAKELLMKDQDQEDGEEDQCAICLQGFISEIEVTKLPCSHVYHFDCILRWLRHKDTCPLCRNVVEFRV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3192 221 Pfam Ring finger domain 171 214 IPR001841 -
Aev06g3192 221 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKE 153 218 - -
Aev06g3192 221 SUPERFAMILY RING/U-box 160 219 - -
Aev06g3192 221 ProSiteProfiles Zinc finger RING-type profile. 173 214 IPR001841 -
Aev06g3192 221 SMART ring_2 173 213 IPR001841 -
Aev06g3192 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 218 IPR013083 -
Aev06g3192 221 PANTHER SI:CH211-59O9.10 153 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3192 Aev-Chr6 33432272 33432937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3192 149 217 C3H Transcription Factor Family AT1G80400 40.845 2.21e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3192 - - lang:109363624 145.591