Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3190 ATGAGTTTTGGGGGCTTTTTTGAGAACAAACCAGGTGGTGGTGGTGGTAGAATCATTGCTGATATACCTTACATGAATGGTTCCAACATCAGCACCAACGATGCAATAGCAACAACAATGGCCTCATCTGGTGCAATAATCTCACAGCCTCGTTTGGCCAAATCCATTTTCAACAACTCCCCTGGCCTCTCTCTTGCCCTTCAAACGAATATAGATGGGCATCATCATCATCAACAAGGGGATATGAATAATAATTTTGAGGGGATGAATAATAATTATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGTAATGGGTTGAGAAGGAGCAGAGAAGAAGAGCATGAAAGCAGATCTGGGAGTGAAAACATGGACGGTGTGTCCGGTGATGAGCTTGATGCTGCCGACAACCACCACCCACCAAGGAAGAAGCGTTATCACCGACACACTCCTCAGCAGATTCAAGAGCTTGAAGCGCTGTTCAAGGAGTGTCCTCACCCTGATGAGAAGCAAAGGCTTGAACTTAGCAAAAGGCTTTGCTTGGAAACTAGGCAAGTCAAGTTTTGGTTCCAAAATAGAAGAACTCAAATGAAGACACAATTGGAACGGCATGAGAATTCACTACTTAGGCAAGAGAATGATAAGCTAAGAGCTGAGAACATGTCATTGAGGGAAGCAATGAGGAACCCATTTTGCACAAACTGTGGAGGACCAACAATTGTTGGTGACATCTCATTGGAAGAACAGCATCTTAGGATTGAGAATGCTAGGTTGAAGGATGAGCTAGACCGGGTTTGCGCCCTCGCCGGCAAGTTCTTGGGCCGCCCCATTCCCTCAATTTCCACTCCTCCATTGCCTAACTCAAGCTTGGAGCTTGGTGTTGGTGGTTTGAGCAATGTGAATTCCTCAACATTGCCTTTAGGACCCGAATTCGGATCAATGATGGTTTCACCTCCTCCAATTCCAATCAGGCCTAATGTAACATCATCAACAACAACAAATAATAATAATAATGTTGTGACATCTTCCTTGTCGTCGGGATTTGATAGATCAGTTGAGAGGTCGATGCTCTTGGAGCTTGCTCTGGCTGCAATGGATGAGTTGGTTAAGATGGCTCAGAGTGGTGAACCACTTTGGATGAGGGGTTTTGAAGGTGGGAGTAGAGAAGTACTTAACCATGAGGAGTATACTAGGACCATGACTCCTTGTATTGGTTTGAGACCAAATGGTTTTGTCTCTGAGGCTTCTAGAGAAACTGCCATGGTCATCATCAATAGCTTAGCACTTGTTGAGACTTTAATGGACTCGAATCGATGGTCAGAAATGTTCTCATGTATGATTGCAAGGACTTCTACAACTGAGGTGATATCAAGTGGAATTAATGGAACAAGAAATGGTGCACTTCAACTAATGAATGCAGAAGTGCAAGTACTATCACCGTTGGTTCCAGTGCGTGAAGTCAATTTTCTACGGTTTTGCAAGCAGCACGCAGAAGGGGTCTGGGCTGTGGTTGATGTGTCAATAGATACCATTAGGGATTCTTCTGGTGCTCCCACTTTTGTTAGCTCCAGGAAGCTCCCTTCTGGTTGTGTCATGCAAGATATGCCTAATGGTTACTCTAAGGTGACATGGGTGGAACATGCAGAATATGAGGAAAGGGAAATTCACGAGCTTTATAGGCCGTTGGTGAGGTCAGGAATGGCTTTTGGTGCACAACGTTGGGTTGCCACCCTTCAACGCCAATGCCACTGCTTAGCCATTCTCATGTCTTCAGCTCTAGTGGTTTCCCCTCCTCAACACTCCGCAATAACCTCAGGTGGAAGGCGAAGCATGCTGAAGCTAGCACAGCGCATGACCAACAACTTCTGTGCCGGTGTATGTGCCTCCACGGTGCACAAATGGAACAAGCTCAACGCCGGCAATATCGGCGAAGATGTGAGGGTTATGACAAGGAAGAGTCTAGACGATCCTGGGGAGCCACCCGGGATCGTGCTAAGCGCAGCCACATCTGTGTGGCTGCCGGTCTCGCCACAAAGGCTGTTCGATTTCCTCCGTGACGAGCGGATGAGGAGCGACTGGGACATTCTGTCCAATGGCGGACCGATGCAGGAGATGGCTCACATTGCCAAGGGACAAGATCATGGCAACTGCGTTTCACTACTACGAGCCAGTGCTATGAATTCAAACCAAAGTAGCATGCTGATCCTGCAGGAAACATGCACAGACGCGTCCGGGTCGCTTATAGTGTACGCGCCGGTTGACATTCCTGCCATGCACTTGGTCATGAACGGCGGCGACTCGGCTTACGTGGCGCTTCTACCATCTGGATTTGCCATCGTGCCTGATGGATCCAATGGCAGGAGCCACCAAAATGCCGTGTCGCAGCCGGGACCGAGTGGATCCCTGCTTACGGTGGCGTTTCAAATCCTCGTGAACAGCCTCCCCTCGGCTAAGCTCACGGTGGAGTCAGTGGAAACGGTGAACAACCTCATCTCATGCACCGTACAGAAGATAAAAGCTGCTCTTCAATGTGAGGGTTGA 2559 0.4713 MSFGGFFENKPGGGGGRIIADIPYMNGSNISTNDAIATTMASSGAIISQPRLAKSIFNNSPGLSLALQTNIDGHHHHQQGDMNNNFEGMNNNYNNNNNNNNNNNNNNNNSNGLRRSREEEHESRSGSENMDGVSGDELDAADNHHPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSLREAMRNPFCTNCGGPTIVGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPIPSISTPPLPNSSLELGVGGLSNVNSSTLPLGPEFGSMMVSPPPIPIRPNVTSSTTTNNNNNVVTSSLSSGFDRSVERSMLLELALAAMDELVKMAQSGEPLWMRGFEGGSREVLNHEEYTRTMTPCIGLRPNGFVSEASRETAMVIINSLALVETLMDSNRWSEMFSCMIARTSTTEVISSGINGTRNGALQLMNAEVQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRDSSGAPTFVSSRKLPSGCVMQDMPNGYSKVTWVEHAEYEEREIHELYRPLVRSGMAFGAQRWVATLQRQCHCLAILMSSALVVSPPQHSAITSGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNIGEDVRVMTRKSLDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERMRSDWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCTDASGSLIVYAPVDIPAMHLVMNGGDSAYVALLPSGFAIVPDGSNGRSHQNAVSQPGPSGSLLTVAFQILVNSLPSAKLTVESVETVNNLISCTVQKIKAALQCEG* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3190 852 MobiDBLite consensus disorder prediction 113 127 - -
Aev06g3190 852 SUPERFAMILY Homeodomain-like 132 206 IPR009057 -
Aev06g3190 852 Pfam START domain 365 589 IPR002913 GO:0008289
Aev06g3190 852 SMART HOX_1 147 210 IPR001356 GO:0003677
Aev06g3190 852 MobiDBLite consensus disorder prediction 74 156 - -
Aev06g3190 852 Pfam Homeodomain 149 204 IPR001356 GO:0003677
Aev06g3190 852 ProSiteProfiles 'Homeobox' domain profile. 146 206 IPR001356 GO:0003677
Aev06g3190 852 ProSiteProfiles START domain profile. 356 593 IPR002913 GO:0008289
Aev06g3190 852 MobiDBLite consensus disorder prediction 82 112 - -
Aev06g3190 852 CDD START_ArGLABRA2_like 360 588 - -
Aev06g3190 852 SUPERFAMILY Bet v1-like 358 588 - -
Aev06g3190 852 SMART START_1 365 590 IPR002913 GO:0008289
Aev06g3190 852 SUPERFAMILY Bet v1-like 620 845 - -
Aev06g3190 852 Coils Coil 200 235 - -
Aev06g3190 852 ProSitePatterns 'Homeobox' domain signature. 181 204 IPR017970 GO:0000981|GO:0006355
Aev06g3190 852 Gene3D - 137 222 - -
Aev06g3190 852 CDD homeodomain 148 206 IPR001356 GO:0003677
Aev06g3190 852 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 102 849 - -
Aev06g3190 852 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 102 849 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3190 Aev-Chr6 33406100 33413354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3190 1 851 Homeobox Transcription Factor Family AT3G61150 61.503 0.0 1004
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev06g3190 START 4.1e-54 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3190 K09338 - gmx:100783614 1224.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3190 06 33406100 33413354 Aev06g3190 06 33406100 33413354 ECH
Aev02g0348 02 2520769 2528430 Aev06g3190 06 33406100 33413354 ECH