Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3187 ATGCAAAATTCAAATCCTTCGCCGCCCTCTCCGGCTGGTTCTGCCGCCGTGGACACGGCGCCGTTTCTCCTCCGCAGTCGCCGCTTCCTCCACCGTACGCCGCCTCCACTACGAACGGCGGCGCGTCTCTTCCGTCAGGCCTCAGGGCGGCGGATGATGCTCCGTGAGCCGTCGGTGCGCGTCCGTGAGGCGGCGGCGGCGGAGCTTGAGGGTCGGCAGAGCGACTGGGCCTACTCCAAACCCGTGGTGGCGCTCGACGTGCTTTGGAACATAGCAATCTTGCTCGTTGGTGTTGCGATTCTGTGCATCAGCACAAAAGAGGATCCTTGTGTTCCCTTGAGGGTTTGGATTGTAGGGTACCTTTTGCAAGGTGTGGTTCACTCTGTTTCTGTTGTTGTGGAGTTTAGGAGGAGGAGGATGAGGATGAGAAGAAGAAGGAGCCAAGAGGGTGGTTCTTTTGAGGCTGCAAGGGAGTGGAGTTTCAGTTCTGAGAGTGATGATTCAGGTTATGATGATTTGGAGCATTTTCTGCAGGGTGAGGGTAACAGCATAATGAAACATGTTGAGTCGGCGAATACCATGATTTCTTTCTTATGGTGGATTGCTGGGTTCTACTGGGTAACTGCTGGCGGTCAGAGTTTGACGAGAGATTCACCGCAGCTTTACTGGCTCTCCATTACGTTTCTTGCTTTCGATGTTGTCATTGTACTGATCTGTGTTGCAGTCGCATGTCTGATTGGTATTGCTGTTTGCTGCTGTCTCCCATGCATACTTGGTATTTTGTATGTGGTGGCAGATCAGGAAGGGGCAAGCAATGATGAGATTGACCAGTTGCCAAAATATAGGTTCAAAATGATAAAGGAATCTAACAAAGAAGGTGACGACATTCCAGAACCTTCTAGAGGAATAATGATGGAATGTGACAATGAGGGAGCTGATGAACATGCTATTGCCTTAGAAGATGCAGAATGCTGTATCTGCCTTTCTTCCTATGACGATGGCGACGAACTGAGAGAACTTCCTTGCAACCACCATTTCCATCGCACATGCATCGACAAATGGCTGCTTCTAAATGCTACTTGCCCTCTCTGCAAGTTCAACATTTTGAGGAATGATAACCACCACCAAGAAGTTTGA 1137 0.5013 MQNSNPSPPSPAGSAAVDTAPFLLRSRRFLHRTPPPLRTAARLFRQASGRRMMLREPSVRVREAAAAELEGRQSDWAYSKPVVALDVLWNIAILLVGVAILCISTKEDPCVPLRVWIVGYLLQGVVHSVSVVVEFRRRRMRMRRRRSQEGGSFEAAREWSFSSESDDSGYDDLEHFLQGEGNSIMKHVESANTMISFLWWIAGFYWVTAGGQSLTRDSPQLYWLSITFLAFDVVIVLICVAVACLIGIAVCCCLPCILGILYVVADQEGASNDEIDQLPKYRFKMIKESNKEGDDIPEPSRGIMMECDNEGADEHAIALEDAECCICLSSYDDGDELRELPCNHHFHRTCIDKWLLLNATCPLCKFNILRNDNHHQEV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3187 378 Pfam Ring finger domain 323 365 IPR001841 -
Aev06g3187 378 SUPERFAMILY RING/U-box 314 371 - -
Aev06g3187 378 CDD RING-H2_RNF111_like 323 367 - -
Aev06g3187 378 ProSiteProfiles Zinc finger RING-type profile. 324 365 IPR001841 -
Aev06g3187 378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 303 374 IPR013083 -
Aev06g3187 378 SMART ring_2 324 364 IPR001841 -
Aev06g3187 378 PANTHER TARGET OF ERK KINASE MPK-1 3 378 - -
Aev06g3187 378 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3187 Aev-Chr6 33379609 33382665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3187 7 375 C3H Transcription Factor Family AT1G68070 49.731 1.36e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3187 - - gmx:100795425 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3187 06 33379609 33382665 Aev06g3187 06 33379609 33382665 ECH