Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3147 ATGAGTGTCAACAATGTCAACGGTTATGGTGGTGGGAACCATGGTGGTGGTGGTGGAAGCAACAACGGCAGCCCATGTGGGGCATGCAAGTTCCTGAGAAGGAAGTGTGTACCGGAATGCATTTTTGCTCCGTATTTTGATTCGGAGCAAGGTGCTACCCATTTCGCAGCGGTGCACAAGGTGTTTGGGGCCAGCAATGTGTCAAAGCTTCTCCTCAATATTCCAGTGCAGAGGAGACTCGACGCGGTGATTACCATTTGTTATGAAGCACATTCGCGCCTAAGAGATCCGGTGTATGGTTGTGTAGCCCACATTTTTGCCCTTCAGCAACAGTTGGTGGCTTTACAAGCAGAACTCAACTACTTACATGGCCAACTTGCTACAATGGAGCTACCCCAGCAAGCACCGGTTGCTCCTCCTCCTCCGCCGCCACATTCAGCTGTGCCGCCGCCAGTTTTCTCGATCGCCGACTTACCAGCCGCCCCAACTGCTGCCGCCTCATCCATGCCGGCCCACTTGGACGTATCTTCACTATTTGAACCATCAATGGGCCAACCTTCATGGGCCATGCAGCAGCGGGCCATGATGGACCCACGCCAATACCTGGCGGCGGCCCAATTAGGCCCATTAGGTGGTGGTGATCTTCATACCGTGGCACGTGAGTTCATGCATAGACACGTGACTGTAGCATATCCACCTGCACCAGAAGCTCAAGGCTCCAATGCAGCATCATCATCTCAATCACTTTCTTCTAAGTGA 759 0.5296 MSVNNVNGYGGGNHGGGGGSNNGSPCGACKFLRRKCVPECIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVQRRLDAVITICYEAHSRLRDPVYGCVAHIFALQQQLVALQAELNYLHGQLATMELPQQAPVAPPPPPPHSAVPPPVFSIADLPAAPTAAASSMPAHLDVSSLFEPSMGQPSWAMQQRAMMDPRQYLAAAQLGPLGGGDLHTVAREFMHRHVTVAYPPAPEAQGSNAASSSQSLSSK* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3147 252 ProSiteProfiles LOB domain profile. 24 126 IPR004883 -
Aev06g3147 252 PANTHER LOB DOMAIN CONTAINING PROTEIN 7 228 - -
Aev06g3147 252 Pfam Lateral organ boundaries (LOB) domain 25 122 IPR004883 -
Aev06g3147 252 MobiDBLite consensus disorder prediction 232 252 - -
Aev06g3147 252 MobiDBLite consensus disorder prediction 238 252 - -
Aev06g3147 252 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 7 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3147 Aev-Chr6 33014913 33018309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3147 28 225 AS2 family AT2G45420 58.173 8.21e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev06g3147 LOB 5.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3147 K21994 - rcu:8270648 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3147 06 33014913 33018309 Aev06g3147 06 33014913 33018309 ECH
Aev06g3147 06 33014913 33018309 Aev02g2051 02 22112048 22118029 PCT