Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3121 ATGTCTGCAAATTCGGAGAACATTGCAGTTTGTTCTCTCTGCCAGAAGGCACTATCACCTGATAATGAGATAACAACAAGTGATCCTGCAACCAATGGTATGTGTGGTGATTGTAAGTTTCTACTACTAGAAGACTATGGTGGTCATGTGGCTCCCCGAAGCTCGCAGAGAAGGCTTAGAAGGAGATTCAGGCACAACAGTTCGGAGTCAATTGAGAATATGTTCAATGCTCTGAGGCAAAACCAATACACTGCATCTGCAGAGGAAGATCAACAAGTTTTAGAGTCGTTGCAGTATGGTAGTAGTACGCATACTACCCCTAGCCGCTCTAGAAGTTGGAGGCGGGTTCTCTCTGATACTGACAGTGATGGTTTTGATAATTGGAGCTCTCTTTATGGTGACAATGAGTCGAACACTAGCTTTAGACGTTTTAGGGTTCCGCATGGTGAGACTGATTCGTTCTCTTTCAGTGCTTATGGAGGTGACTCGGATGTCTCTATGGACAGACATAGTATTTTAGGTGTAGGAATGTTTGATTTACTAGATGAGGGAGATGCATTTGATAGTGACACTGATATAGATCCAATGCATGCTGGCCTCGGCCAATGGAACTCTGATGATATGGAAGATGATGAGGAAGAAGAGGATGATGATGAGGAGGAGGAGGAGGAAGAAGACGAGGAGGAGGGCGATGAAAGGGAATGGGAACTAGCTGATGTTGATGAAGCTGAAGCTGCAGCTCGCCTCCAAATTTTTCTCACCTCAAATCCACGTGAGAATAGGGGTCGCATAACTGAGTCCGAGGTTGCCCAGATAATCAGCAATTTGCGAAGTTTCACTGATGGTGGCTACCCTAACTTGGGGGATGCTGGTTTATCTCCCTACGGTGCAAACTTTGGTGATTACCTTGATGCTAGACAATTCGATGATCTTATGGAGCATCTTGCTGAGAATGACAGCACAAGACGAGGAGCACCACCTGCATCTCTGTCTTTTGTGAATAATCTGCCCCGTGTAGTAATTGGCAAGGAGCATGATAAGCATGGCGAACTAGTTTGTGCTATTTGCAAGGATGTCTTGGCTCTTGGCACGGAAGCAAGTCAGCTTCCCTGTGCTCACCTTTATCACACCTGTTGCATTTTGCCATGGTTGAGCTCACGAAATTCATGTCCTCTATGTCGATATGAGCTTCCAACTGATGATAAGGATTATGAAGAGGGAAAGCAGAACATTGATGGTAGACAAGTGATCAACGAGAGGCAGCAGCTAGATGAGGTGGATGATAGTTCCTCTGATATCTCCGATGGGGCTGAAGTGAATGAAGCGGATACTACTAGTCAAAGCATAATACAGCAGAGAGAAGTTGTGAGCTCAGATTCCACCATGAATTCTTCTGCAGTTAGAGGTGGTAGAGGAAGATGGTTTTTTCTTGCTGCAGCTCCAATTGTTAGTTTAGTCGGAATTGTGCTTGTCCTGTGGTTAGGCAACTCTCAGATTGAAGGGAGTAGACACCTCGGCGCTCGCAATTTGTCCGTGCAACATCAGCATGCAGTTCATGTGTATGCCTCACCTGACCAAAGGGAGAGTAGGACCAGAAGATGGTGGTGCCCTTTCTAA 1617 0.4576 MSANSENIAVCSLCQKALSPDNEITTSDPATNGMCGDCKFLLLEDYGGHVAPRSSQRRLRRRFRHNSSESIENMFNALRQNQYTASAEEDQQVLESLQYGSSTHTTPSRSRSWRRVLSDTDSDGFDNWSSLYGDNESNTSFRRFRVPHGETDSFSFSAYGGDSDVSMDRHSILGVGMFDLLDEGDAFDSDTDIDPMHAGLGQWNSDDMEDDEEEEDDDEEEEEEEDEEEGDEREWELADVDEAEAAARLQIFLTSNPRENRGRITESEVAQIISNLRSFTDGGYPNLGDAGLSPYGANFGDYLDARQFDDLMEHLAENDSTRRGAPPASLSFVNNLPRVVIGKEHDKHGELVCAICKDVLALGTEASQLPCAHLYHTCCILPWLSSRNSCPLCRYELPTDDKDYEEGKQNIDGRQVINERQQLDEVDDSSSDISDGAEVNEADTTSQSIIQQREVVSSDSTMNSSAVRGGRGRWFFLAAAPIVSLVGIVLVLWLGNSQIEGSRHLGARNLSVQHQHAVHVYASPDQRESRTRRWWCPF* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3121 538 MobiDBLite consensus disorder prediction 189 236 - -
Aev06g3121 538 MobiDBLite consensus disorder prediction 205 236 - -
Aev06g3121 538 SUPERFAMILY RING/U-box 341 400 - -
Aev06g3121 538 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 288 469 - -
Aev06g3121 538 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1 288 469 - -
Aev06g3121 538 Pfam Ring finger domain 353 394 IPR001841 -
Aev06g3121 538 SMART ring_2 353 393 IPR001841 -
Aev06g3121 538 ProSiteProfiles Zinc finger RING-type profile. 353 394 IPR001841 -
Aev06g3121 538 Coils Coil 205 229 - -
Aev06g3121 538 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 313 400 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3121 Aev-Chr6 32772829 32774445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3121 1 538 C3H Transcription Factor Family AT5G01980 41.489 7.34e-116 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3121 - - gmx:100800933 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3121 06 32772829 32774445 Aev06g3121 06 32772829 32774445 ECH