Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3119 ATGGAACCGAGCCCTGATACCATGTTCAGAGCTCCTTCTGCAGGAGTTGTAGTAGCAGGAGGATCAGGATCAGGATCAGGACCTTCTTCTTCCTCCTCTTCATCGCTTTCTTCGTCGTCTTCGTCAATGTCTTTGTCGTCTTCGAATTCTAGAAGGTTCGGGACACTTTCTCCCTCCAACATCATCCACGCGCCTTTGTCTCTGTTATTGGAGTATTCTGGGATTCTTCGAACCGCTAACATGAGGTCCAATCACCATCAAGCTAACCCTAACCCTAATTCCGAAGCTGGGCCCAATGATGGCGAGGTTTCCATCAGGATCATTGGACCATCGGAACATGAGAATCATCATCATCATCATCATCGCAGAGAAGAATCAACACCTTCATCTTCATCATCTTCTTCTTCGGGTGGTGGTGGTTTGGTTGTTGGGCATTCTCGTAATGAGGGTATGGGCAATGAAGACATGACTGGGGCTGCCACCGGTGACGGAGGGATTGGGCATAGTTCGGATGCCGAAGCTGGCGGAGATGGCGGTGGTGCTAATGGGAGGGATTCTTCTTACCAGCGGTATGATATTCAGCATGCTGCACGGTGGGTAGAGCAGGTTCTGCCGTTCTCTTTGCTCCTTTTGGTGGTTTTCATTCGCCAGCATTTGCAAGGGTTTTTTGTTACTATTTGGATTGCGGCTGTTCTTTTCAAGTCCAATGACATTCTAAAGAAACAAACAGCTCTGAAGGGAGAGAGGAAAATACCTGTTCTAGTTGGGATTTCTGTTGCATTTGCGCTTCATGTGGTTGGCGTATATTGGTGGTATCAGAACGATGATCTGATGTATCCACTGGTCATGCTTCCTCCTCGAGAGATACCACCCTTCTGGCATGCAATTTTCATCATCATGGTGAATGATACTTTGGTACGCCAGGCTGCGATGGTATTCAAGTGTATGCTGTTGATGTATTACAAGAATAGCAGGGGGAGAAATTATCGTAAGCAGGGGCAACTGCTGACCTTAGTTGAATACCTTCTTCTGCTTTACCGTGCCTTGTTGCCAACACCGGTTTGGTATCGTTTCTTTCTGAACAAAGAATATGGAAGCCTCTTTTCATCGCTGATGACAGGACTGTATCTAACATTTAAGCTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCAGTGAAGGCATTGTCTCGTAAAGAAGTGCACTATGGGGCTTATGCAACATCAGAACAGGTCAATGCAGCTGGTGATCTTTGTGCTATTTGTCAGGAGAAGATGCATGCCCCAATATTACTTCGTTGTAACCACATTTTCTGTGAAGATTGTGTATCAGAGTGGTTTGAGAGGGAAAGAACGTGCCCATTGTGCAGAGCTTTGGTAAAACCTGCAGACCTAAGGTCATTCGGTGATGGTTCTACCAGTTTATTTTTCCAGTTATTCTGA 1449 0.4603 MEPSPDTMFRAPSAGVVVAGGSGSGSGPSSSSSSSLSSSSSSMSLSSSNSRRFGTLSPSNIIHAPLSLLLEYSGILRTANMRSNHHQANPNPNSEAGPNDGEVSIRIIGPSEHENHHHHHHRREESTPSSSSSSSSGGGGLVVGHSRNEGMGNEDMTGAATGDGGIGHSSDAEAGGDGGGANGRDSSYQRYDIQHAARWVEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILKKQTALKGERKIPVLVGISVAFALHVVGVYWWYQNDDLMYPLVMLPPREIPPFWHAIFIIMVNDTLVRQAAMVFKCMLLMYYKNSRGRNYRKQGQLLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAAVKALSRKEVHYGAYATSEQVNAAGDLCAICQEKMHAPILLRCNHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3119 482 SUPERFAMILY RING/U-box 414 464 - -
Aev06g3119 482 MobiDBLite consensus disorder prediction 107 127 - -
Aev06g3119 482 MobiDBLite consensus disorder prediction 1 52 - -
Aev06g3119 482 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 33 482 IPR044235 GO:0061630|GO:1904294
Aev06g3119 482 CDD RING-HC_RNFT1_like 420 459 - -
Aev06g3119 482 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 33 482 - -
Aev06g3119 482 ProSitePatterns Zinc finger RING-type signature. 436 445 IPR017907 -
Aev06g3119 482 MobiDBLite consensus disorder prediction 23 52 - -
Aev06g3119 482 MobiDBLite consensus disorder prediction 83 183 - -
Aev06g3119 482 SMART ring_2 421 458 IPR001841 -
Aev06g3119 482 ProSiteProfiles Zinc finger RING-type profile. 421 459 IPR001841 -
Aev06g3119 482 MobiDBLite consensus disorder prediction 83 98 - -
Aev06g3119 482 Pfam Zinc finger, C3HC4 type (RING finger) 419 462 - -
Aev06g3119 482 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 396 469 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3119 Aev-Chr6 32754505 32758539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3119 51 482 C3H Transcription Factor Family AT5G01960 70.833 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3119 - K22379 aip:107639742 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3119 06 32754505 32758539 Aev06g3119 06 32754505 32758539 ECH