Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev06g3119 | ATGGAACCGAGCCCTGATACCATGTTCAGAGCTCCTTCTGCAGGAGTTGTAGTAGCAGGAGGATCAGGATCAGGATCAGGACCTTCTTCTTCCTCCTCTTCATCGCTTTCTTCGTCGTCTTCGTCAATGTCTTTGTCGTCTTCGAATTCTAGAAGGTTCGGGACACTTTCTCCCTCCAACATCATCCACGCGCCTTTGTCTCTGTTATTGGAGTATTCTGGGATTCTTCGAACCGCTAACATGAGGTCCAATCACCATCAAGCTAACCCTAACCCTAATTCCGAAGCTGGGCCCAATGATGGCGAGGTTTCCATCAGGATCATTGGACCATCGGAACATGAGAATCATCATCATCATCATCATCGCAGAGAAGAATCAACACCTTCATCTTCATCATCTTCTTCTTCGGGTGGTGGTGGTTTGGTTGTTGGGCATTCTCGTAATGAGGGTATGGGCAATGAAGACATGACTGGGGCTGCCACCGGTGACGGAGGGATTGGGCATAGTTCGGATGCCGAAGCTGGCGGAGATGGCGGTGGTGCTAATGGGAGGGATTCTTCTTACCAGCGGTATGATATTCAGCATGCTGCACGGTGGGTAGAGCAGGTTCTGCCGTTCTCTTTGCTCCTTTTGGTGGTTTTCATTCGCCAGCATTTGCAAGGGTTTTTTGTTACTATTTGGATTGCGGCTGTTCTTTTCAAGTCCAATGACATTCTAAAGAAACAAACAGCTCTGAAGGGAGAGAGGAAAATACCTGTTCTAGTTGGGATTTCTGTTGCATTTGCGCTTCATGTGGTTGGCGTATATTGGTGGTATCAGAACGATGATCTGATGTATCCACTGGTCATGCTTCCTCCTCGAGAGATACCACCCTTCTGGCATGCAATTTTCATCATCATGGTGAATGATACTTTGGTACGCCAGGCTGCGATGGTATTCAAGTGTATGCTGTTGATGTATTACAAGAATAGCAGGGGGAGAAATTATCGTAAGCAGGGGCAACTGCTGACCTTAGTTGAATACCTTCTTCTGCTTTACCGTGCCTTGTTGCCAACACCGGTTTGGTATCGTTTCTTTCTGAACAAAGAATATGGAAGCCTCTTTTCATCGCTGATGACAGGACTGTATCTAACATTTAAGCTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCAGTGAAGGCATTGTCTCGTAAAGAAGTGCACTATGGGGCTTATGCAACATCAGAACAGGTCAATGCAGCTGGTGATCTTTGTGCTATTTGTCAGGAGAAGATGCATGCCCCAATATTACTTCGTTGTAACCACATTTTCTGTGAAGATTGTGTATCAGAGTGGTTTGAGAGGGAAAGAACGTGCCCATTGTGCAGAGCTTTGGTAAAACCTGCAGACCTAAGGTCATTCGGTGATGGTTCTACCAGTTTATTTTTCCAGTTATTCTGA | 1449 | 0.4603 | MEPSPDTMFRAPSAGVVVAGGSGSGSGPSSSSSSSLSSSSSSMSLSSSNSRRFGTLSPSNIIHAPLSLLLEYSGILRTANMRSNHHQANPNPNSEAGPNDGEVSIRIIGPSEHENHHHHHHRREESTPSSSSSSSSGGGGLVVGHSRNEGMGNEDMTGAATGDGGIGHSSDAEAGGDGGGANGRDSSYQRYDIQHAARWVEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILKKQTALKGERKIPVLVGISVAFALHVVGVYWWYQNDDLMYPLVMLPPREIPPFWHAIFIIMVNDTLVRQAAMVFKCMLLMYYKNSRGRNYRKQGQLLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAAVKALSRKEVHYGAYATSEQVNAAGDLCAICQEKMHAPILLRCNHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF* | 483 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev06g3119 | 482 | SUPERFAMILY | RING/U-box | 414 | 464 | - | - | |
Aev06g3119 | 482 | MobiDBLite | consensus disorder prediction | 107 | 127 | - | - | |
Aev06g3119 | 482 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Aev06g3119 | 482 | PANTHER | UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN | 33 | 482 | IPR044235 | GO:0061630|GO:1904294 | |
Aev06g3119 | 482 | CDD | RING-HC_RNFT1_like | 420 | 459 | - | - | |
Aev06g3119 | 482 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 33 | 482 | - | - | |
Aev06g3119 | 482 | ProSitePatterns | Zinc finger RING-type signature. | 436 | 445 | IPR017907 | - | |
Aev06g3119 | 482 | MobiDBLite | consensus disorder prediction | 23 | 52 | - | - | |
Aev06g3119 | 482 | MobiDBLite | consensus disorder prediction | 83 | 183 | - | - | |
Aev06g3119 | 482 | SMART | ring_2 | 421 | 458 | IPR001841 | - | |
Aev06g3119 | 482 | ProSiteProfiles | Zinc finger RING-type profile. | 421 | 459 | IPR001841 | - | |
Aev06g3119 | 482 | MobiDBLite | consensus disorder prediction | 83 | 98 | - | - | |
Aev06g3119 | 482 | Pfam | Zinc finger, C3HC4 type (RING finger) | 419 | 462 | - | - | |
Aev06g3119 | 482 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 396 | 469 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev06g3119 | Aev-Chr6 | 32754505 | 32758539 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev06g3119 | 51 | 482 | C3H Transcription Factor Family | AT5G01960 | 70.833 | 0.0 | 629 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev06g3119 | - | K22379 | aip:107639742 | 675.626 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev06g3119 | 06 | 32754505 | 32758539 | Aev06g3119 | 06 | 32754505 | 32758539 | ECH |