Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3096 ATGGTTATGGCTTCTCTAATCAGTACAACTTCAACCACACTTCAACACAATCATCACACAATATGCTTCTTCCCAATGAAATCCACCACCCCAGATAATTTTTCCTTCTTAACTAAACCTTTCAAGAGTAACCCTTTGAAATGCAATGCAATTTTTGATACCATTCCCAAAGATTTGTTAGACTACACTTTTTATATGGACCAGTTTCCAGCATTCAGGTCAGGACTAATGAAGTTTCAAAGTGTAACTGAAGACTTATCAGATATTCAAAAATGGGGGTTTCTGGTTTTTGCTGGGATGGCATGGATTTACTTGACTGCAAGGCCTGGTGTTCTTGTTGGTGCCATTGATGCATATTTTCTGGCTCCTATTCAACTGGTTTTGGACAGTTTATCTGGGAGGAGGAGCCTCAAGAGGAGTGATTTTATGATTGGAGATAAGTTGGGAGAAGGGTCATTTGGTGTTGTTTATTCTGGTGTTTTGGTGTCAAAGAATGAAGAGAATAAGGTGCAGAAGAGTGGAAGAGGGAAGGTTACAAAGTTGGATGTCAAATCTAAGGACAAAGTCATTCTTAAAAAGGTAAAGGTTGGAATTGAAGGGGCTGAAGAATTTGGAGATTTTGAGGAGTGGTTCAATTATAGACTCTCTAGAGCAGCTCCTGAAACATGTGCCAAGTTCCTTGGAAGTTTTATAGCAGATAAAAGCAATTCACATTTCACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGATCAATCTCTTGCTGATTACATGACAGATAGGAACTTTCCCTCAAACTTGGAGTCTGTCATGTTTCGACGCGTCTTGCAAGGCGTGGACTCTTCTAAGCGAAACACATTGATCATCAAGCAAATAATGCGGCAGATCATTACATCGCTTAAGAAAATTCATGACACAGGCATTGTTCATAGGGATGTAAAGCCTGCCAACTTGGTGGTTACTAGACAAGGACAGATTAAACTCATTGATTTTGGTTCAGCAACTGACCTGCGGATTGGAAAGAATTTTGTTCCAAATTGTAACCCTTTGGATCGTGACTACTGTCCCCCTGAATTGTATGTGCTGCCGGAGGAAACATCGAGTCTACCACCGGAGCCGGTTGCAGCTCTTCTTTCACCAATCCTGTGGCAGTTAAAAAGTCCTGATCTGTTTGATATGTATTCTGCTGGGATTGTACTCCTTCAAATGGCAATACCAACCTTAAGGTCTGCAGTTGGTTTGAAGAATTTCAATCTGGAATTGAGAAACTGTGGATACGATTTGAATGAATGGAGGGGCTGGACTCGCAGCAAGTTTGACTTCCAAATCCTCGATAGCGACTCCGGTAGAGGATGGGACTTAGCAACCAAGCTTATCTCAAAGAGAGATTCCTCATCGAGCCGCCGTTTATCGGCTGCAGCCGCTTTGAGGCATCCTTATTTCCTTCTTGGCAGTGATCAGGCAGCACTAGTCCTTTCAAAATTAAGCTTAAGCACAAAGTGA 1509 0.4175 MVMASLISTTSTTLQHNHHTICFFPMKSTTPDNFSFLTKPFKSNPLKCNAIFDTIPKDLLDYTFYMDQFPAFRSGLMKFQSVTEDLSDIQKWGFLVFAGMAWIYLTARPGVLVGAIDAYFLAPIQLVLDSLSGRRSLKRSDFMIGDKLGEGSFGVVYSGVLVSKNEENKVQKSGRGKVTKLDVKSKDKVILKKVKVGIEGAEEFGDFEEWFNYRLSRAAPETCAKFLGSFIADKSNSHFTKGGKWLVWKFEGDQSLADYMTDRNFPSNLESVMFRRVLQGVDSSKRNTLIIKQIMRQIITSLKKIHDTGIVHRDVKPANLVVTRQGQIKLIDFGSATDLRIGKNFVPNCNPLDRDYCPPELYVLPEETSSLPPEPVAALLSPILWQLKSPDLFDMYSAGIVLLQMAIPTLRSAVGLKNFNLELRNCGYDLNEWRGWTRSKFDFQILDSDSGRGWDLATKLISKRDSSSSRRLSAAAALRHPYFLLGSDQAALVLSKLSLSTK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3096 502 Gene3D Phosphorylase Kinase; domain 1 129 250 - -
Aev06g3096 502 Gene3D Transferase(Phosphotransferase) domain 1 275 485 - -
Aev06g3096 502 ProSiteProfiles Protein kinase domain profile. 142 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3096 502 SMART serkin_6 142 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3096 502 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 3 500 IPR044803 GO:0004674|GO:0009579
Aev06g3096 502 SUPERFAMILY Protein kinase-like (PK-like) 139 484 IPR011009 -
Aev06g3096 502 Pfam Protein kinase domain 289 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3096 502 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 3 500 - -
Aev06g3096 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3096 Aev-Chr6 32536472 32539495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3096 142 339 MAP Kinase Kinase Kinase AT3G13530 25.871 2.75e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Aev06g3096 Pkinase 2.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3096 - - gmx:100795624 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3096 06 32536472 32539495 Aev06g3096 06 32536472 32539495 ECH
Aev02g0023 02 114561 116814 Aev06g3096 06 32536472 32539495 PCT