Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3085 ATGAATATGCAATTAAGCATATCTCTACTTGTTCTGTTTCTTTTTTCTTCAGAGCTATTATCTGTGCTCTCTGTTGACCCTGCATTCAATGATGATGTGTTGGGTTTGATTGTGTTCAAGGCTGGTTTGGAAGATCCAAAGGGAAAACTCTCTTCATGGAATGAAGATGATTACACCCCTTGCAATTGGGAAGGTGTAAAATGTGACAACCAAACAAAAAGGGTCTCTTCTCTTATCCTTGATGGGTTCTCTCTTTCAGGACATGTTGATAGAGGGCTCTTGAGGTTGCAGAATCTTAAGATTCTCTCACTCTCAAGGAACAACTTCACTGGTTCTATAAGCCCTGATCTTCCAAAACTTGGTGGCTTGGAAGTTGTTGATTTCAGTGAAAACAACCTCTCTGGATCAATCCCTGAAGGGTTTTTTCAGCAATGTGGTTCTCTGAGGACAGTTTCATTTGCTAGAAACAACCTTATAGGTAAGATTCCTGATTCTTTGAGCTCTTGCTCCAATTTGGCAAATGTTAACTTGTCTTATAATCAACTAAGTGGTGAATTGCCATCTGGGGTGTGGTTCTTGAGGGGGATACAGTCACTTGATCTGTCAAATAACATGCTTGAGGGTGAGATTCCTGAAGGAATTCAGAATCTGTATGATTTGAGGGAGTTGAGTCTGCAGAAGAATCACTTTTCTGGCAAGATTCCTGGTGATATTGGAGGATGCTTGGCTTTGAAATCAATTGATTTCAGCTATAATTTTCTATCTGGGGAACTTCCTGAGTCAATGCAAAGGCTCACTTCATGCACATCACTCAGTTTGCAGGGGAATTCATTCACAGGAACCATTCCTGAATGGATTGCAGAGTTGAATAATCTAGAAATATTGGATCTTTCTGCAAATTCATTTTCGGGTTGGATTCCGAATTCACTAGGAAATCTTGACTCACTTCATAGGCTAAATTTATCTAGGAATCAGTTCACTGGGAATTTGCCAGATTCAATGGCAAATTGCAATAGGCTTTTGGCTTTCGACATAAGCCACAATCATTTGGTAGGCTATATTCCTTGGTGGATTTGGGCAACTTCACTCAGTGAAATGAGGCTACAAAAGAACTCCCTAGGTGGGAGAATTCCGGCACAAATCGAGAAGTGTTCATCTCTAACATCTTTGATTGTTTTCCACAACAAGCTTAATGGTTCAATCCCAGCTTCCATCGCAAATCTAACAAATCTTCAATATGTTGATTTGTCATCAAATGAACTCTCTGGAAGCTTACCTAAGGAGCTTACGAGTCTTTCCCATCTTTTCTCTTTCAATGTATCATATAACCACCTTCAAGGTGAGCTACCGGTGGGTGGCTTCTTCAATACAATCTCCCCATCGTCTGTCTCTGGTAACCCGTTGCTATGTGGTTCTGTTGTCAACCAATCTTGCCCGTCCGATCACCCGAAACCTATCGTCTTAAACCCCAATTCGTCCAGTTCCAACTCCAGCATTTCCTCGCAGAATCAGCATCACAAAATCATACTTAGTATCTCGGCCCTCATTGCAATTGGAGCAGCTGCTTTCATTGCAATTGGTGTGGTGGCTATTACTGTTCTAAATATCCATGTGCGTTCTTCAATGGCCCGTTCTCCTGCTCCGTTTGCTTTCTCTGCTGGCGAGGACTATAGTTGTTCGCCAGCGAACGATCCGAACTATGGCAAGCTTGTCATGTTTACTGGTGATGCAGACTTTGCTGATGGAGCACATAATCTTCTTAACAAGGACAGCGAAATTGGCCGCGGTGGATTTGGAGTTGTTTATCGCACCATCCTTCGAGACGGGCATTCTGTTGCGATCAAGAAGCTTACGGTCTCCAGTTTGATCAAGTCCCAAGAAGACTTTGAGAGGGAAGTGAAAAAACTTGGGAATGTAAGGCACCAAAACCTTGTGGCACTTGAAGGTTATTACTGGACTTCATCCTTGCAGCTCCTCATTTACGAGTACCTATCAAAGGGGAGTTTGCATAAGCTCCTACACGATGATAATAGCAAAGATGTCTTCTCTTGGCGACAGAGGTTCAAGATTATCCTCGGCATGGCAAAAGGATTAGCACATTTGCACCAAATGAACATAATCCATTATAATCTCAAATCAACCAATGTTCTGATTGATTGTTCTGGTGAGCCGAAAATAGGAGACTATGGCCTTGTGAAGCTGTTGCCAATGCTAGACCATTGCGTTCTGAGCAGCAAAATTCAGAGCGCACTCGGGTACATGGCTCCGGAGTTTGCTTGCCGCACGGTTAAGATAACCGAGAAATGCGATATCTACGGTTTCGGAATCCTGGTTCTGGAGGTTGTGACAGGAAAAAGACCTGTGGAATACATGGAGGATGATGTGGTTGTTCTGTGTGACATGGTGAGGGGTGCATTGGAGGAAGGCAAGGTGGAGCAATGTATCGATGGGAGGCTCCTCGGTAATTTTGCCGCAGAAGAAGCGATTCCGGTGATAAAATTGGGGTTAATTTGTGCATCACAAGTTCCATCAAACCGTCCGGATATGGCAGAGGTAGTCAACATATTAGAGTTAATCCAATGCCCTTCAGAAGGACAAGAGGAGTTAGAATGA 2613 0.4305 MNMQLSISLLVLFLFSSELLSVLSVDPAFNDDVLGLIVFKAGLEDPKGKLSSWNEDDYTPCNWEGVKCDNQTKRVSSLILDGFSLSGHVDRGLLRLQNLKILSLSRNNFTGSISPDLPKLGGLEVVDFSENNLSGSIPEGFFQQCGSLRTVSFARNNLIGKIPDSLSSCSNLANVNLSYNQLSGELPSGVWFLRGIQSLDLSNNMLEGEIPEGIQNLYDLRELSLQKNHFSGKIPGDIGGCLALKSIDFSYNFLSGELPESMQRLTSCTSLSLQGNSFTGTIPEWIAELNNLEILDLSANSFSGWIPNSLGNLDSLHRLNLSRNQFTGNLPDSMANCNRLLAFDISHNHLVGYIPWWIWATSLSEMRLQKNSLGGRIPAQIEKCSSLTSLIVFHNKLNGSIPASIANLTNLQYVDLSSNELSGSLPKELTSLSHLFSFNVSYNHLQGELPVGGFFNTISPSSVSGNPLLCGSVVNQSCPSDHPKPIVLNPNSSSSNSSISSQNQHHKIILSISALIAIGAAAFIAIGVVAITVLNIHVRSSMARSPAPFAFSAGEDYSCSPANDPNYGKLVMFTGDADFADGAHNLLNKDSEIGRGGFGVVYRTILRDGHSVAIKKLTVSSLIKSQEDFEREVKKLGNVRHQNLVALEGYYWTSSLQLLIYEYLSKGSLHKLLHDDNSKDVFSWRQRFKIILGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKIGDYGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDIYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEQCIDGRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVVNILELIQCPSEGQEELE* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3085 870 Gene3D Ribonuclease Inhibitor 28 93 IPR032675 -
Aev06g3085 870 SMART LRR_typ_2 313 337 IPR003591 -
Aev06g3085 870 SMART LRR_typ_2 432 456 IPR003591 -
Aev06g3085 870 SMART LRR_typ_2 193 216 IPR003591 -
Aev06g3085 870 SMART LRR_typ_2 408 431 IPR003591 -
Aev06g3085 870 SMART LRR_typ_2 96 119 IPR003591 -
Aev06g3085 870 SMART LRR_typ_2 289 312 IPR003591 -
Aev06g3085 870 SMART LRR_typ_2 217 241 IPR003591 -
Aev06g3085 870 SMART LRR_typ_2 120 144 IPR003591 -
Aev06g3085 870 Pfam Leucine Rich Repeat 197 217 IPR001611 GO:0005515
Aev06g3085 870 Gene3D Phosphorylase Kinase; domain 1 577 663 - -
Aev06g3085 870 Pfam Leucine rich repeat 269 326 IPR001611 GO:0005515
Aev06g3085 870 Pfam Leucine rich repeat 386 445 IPR001611 GO:0005515
Aev06g3085 870 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 360 861 - -
Aev06g3085 870 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 359 - -
Aev06g3085 870 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 360 861 - -
Aev06g3085 870 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 359 - -
Aev06g3085 870 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Aev06g3085 870 Gene3D Transferase(Phosphotransferase) domain 1 664 868 - -
Aev06g3085 870 SUPERFAMILY L domain-like 143 481 - -
Aev06g3085 870 CDD STKc_IRAK 593 859 - -
Aev06g3085 870 SUPERFAMILY L domain-like 47 192 - -
Aev06g3085 870 ProSiteProfiles Protein kinase domain profile. 587 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3085 870 Pfam Protein kinase domain 588 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3085 870 Gene3D Ribonuclease Inhibitor 94 481 IPR032675 -
Aev06g3085 870 SUPERFAMILY Protein kinase-like (PK-like) 588 860 IPR011009 -
Aev06g3085 870 ProSitePatterns Protein kinases ATP-binding region signature. 593 616 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3085 Aev-Chr6 32451088 32454102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3085 6 867 Receptor kinase-like Gene Family AT5G01890 56.392 0.0 1017
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Aev06g3085 Pkinase 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3085 - - sly:101254001 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3085 06 32451088 32454102 Aev06g3085 06 32451088 32454102 ECH
Aev06g3085 06 32451088 32454102 Aev02g1972 02 21491804 21498490 PCT