Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3058 ATGGGAAGGAACGAAGGAGGAAGGAACCGATCTAACAACGATGATCCAACTTCACCGCCGCAAACGCCGAATCAAACCATAATAATTTCATACGAAAAATACATGGAATGTAAGAGGAACATTGCGGAGCGTATAGGAGGATGTGTGTATGACGGATGTAGGGAATTTGTGGCAAGTGGGGCAGAGGGAACACCTGCTGCACTCATATGTGCGGCATGTCAATGCAACAGGAGCTTCCATAAGACCGTTATTCACACTGAGGTCATCAACCTTGATCGTGCTCATAATCCTCCTCCTCCTCCTCCTGCGGCGGCACCGGAGGCGCTACCGCTTGAGTGA 339 0.4985 MGRNEGGRNRSNNDDPTSPPQTPNQTIIISYEKYMECKRNIAERIGGCVYDGCREFVASGAEGTPAALICAACQCNRSFHKTVIHTEVINLDRAHNPPPPPPAAAPEALPLE* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3058 112 MobiDBLite consensus disorder prediction 1 24 - -
Aev06g3058 112 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 34 83 IPR006456 -
Aev06g3058 112 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 33 81 IPR006456 -
Aev06g3058 112 Pfam ZF-HD protein dimerisation region 33 83 IPR006456 -
Aev06g3058 112 PANTHER ZF-HD HOMEOBOX PROTEIN, CYS/HIS-RICH DIMERIZATION DOMAIN-CONTAINING PROTEIN-RELATED 32 88 - -
Aev06g3058 112 MobiDBLite consensus disorder prediction 92 112 - -
Aev06g3058 112 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 32 88 - -
Aev06g3058 112 MobiDBLite consensus disorder prediction 94 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3058 Aev-Chr6 32141413 32141751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3058 29 89 ZF-HD Transcription Factor Family AT1G74660 55.738 1.05e-18 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev06g3058 ZF-HD_dimer 4.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3058 - - ahf:112740680 90.8929