LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g3057	ATGGCAGTCTCAGCTCAATTGTCCTCTAATTTTTACGACACAACATGTCCTAATGCGCTCTCGACCATTAAGAGTGCTGTGGACTCCGCTGGATGTGATGCATCAGTTCTATTAAACGACACATCAAGTTTCACAGGTGAACAAACGGCATTTCCAAACGTTAATTCCATAAGGGGTTTTGGAGTAATAGACAACATAAAATCCCAAGTTGAGAGCTTGTGCCCTGGTGTTGTCTCTTGTGCTGATATACTCGCTGTAGCTGCCAGAGACTCTGTTGTTGCTCTTGGAGGACCAAGTTGGACGGTGCAATTGGGGAGAAGAGACTCAACCACAGCAAGTAAAAGCTCTGCTAATTCAGACTTGCCAGCTCCCTCTTTGGATTTAGATGGCCTTATCAAGGCTTTCTCAGACAAAGGTTTCACAACCAAAGAAATGGTTGCTCTATCAGGATCTCACACAATTGGACAAGCAAGTTGTACAAACTTTAGAACAAGGATTTACAATGAGACCAACATAGATCCATCTTTTGCTCAATCACTTCAAGCAAATTGTCCTAGCGTAGGTGGTGATGGCAATTTGTCACCACTAGACACCACAAGTCCAACCTCCTTCGACAATGCTTACTTCAAGAACTTACAGAGCCAAAAGGGTCTCCTCCACTCGGACCAACAACTCTTCAACAACGGATCCACGGACTCTATGGTAAACGATTACAGCAGCGATTCCAATAGCTTTGCGACGGATTTCGCAAATGCAATGGTTAAAATGGGGAACCTTAGCCCTCTCACCGGCTCTAGTGGTGAGATTAGGACCAATTGCTGGAAGACTAATTAA	834	0.4436	MAVSAQLSSNFYDTTCPNALSTIKSAVDSAGCDASVLLNDTSSFTGEQTAFPNVNSIRGFGVIDNIKSQVESLCPGVVSCADILAVAARDSVVALGGPSWTVQLGRRDSTTASKSSANSDLPAPSLDLDGLIKAFSDKGFTTKEMVALSGSHTIGQASCTNFRTRIYNETNIDPSFAQSLQANCPSVGGDGNLSPLDTTSPTSFDNAYFKNLQSQKGLLHSDQQLFNNGSTDSMVNDYSSDSNSFATDFANAMVKMGNLSPLTGSSGEIRTNCWKTN*	278

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev06g3057	277	PRINTS	Plant peroxidase signature	18	38	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	PRINTS	Plant peroxidase signature	58	71	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	PRINTS	Plant peroxidase signature	251	264	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	PRINTS	Plant peroxidase signature	77	87	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	PRINTS	Plant peroxidase signature	211	228	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	PRINTS	Plant peroxidase signature	143	155	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	PRINTS	Plant peroxidase signature	96	111	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	PRINTS	Plant peroxidase signature	195	210	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	PANTHER	PEROXIDASE	30	277	-	-
Aev06g3057	277	PANTHER	PEROXIDASE 72-RELATED	30	277	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	Gene3D	Peroxidase, domain 2	122	256	-	-
Aev06g3057	277	Pfam	Peroxidase	30	241	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	ProSiteProfiles	Plant heme peroxidase family profile.	31	277	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	Gene3D	-	31	273	-	-
Aev06g3057	277	PRINTS	Haem peroxidase superfamily signature	78	95	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	PRINTS	Haem peroxidase superfamily signature	144	159	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	PRINTS	Haem peroxidase superfamily signature	96	108	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	PRINTS	Haem peroxidase superfamily signature	197	212	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Aev06g3057	277	CDD	secretory_peroxidase	6	276	IPR033905	GO:0004601\|GO:0042744
Aev06g3057	277	ProSitePatterns	Peroxidases proximal heme-ligand signature.	144	154	IPR019793	-
Aev06g3057	277	SUPERFAMILY	Heme-dependent peroxidases	6	277	IPR010255	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g3057	Aev-Chr6	32136845	32140226	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g3057	3	277	Peroxidase	AT5G05340	62.207	5.39e-132	375

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g3057	K00430		-	gmx:100815671	437.573

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev06g3057	06	32136845	32140226	Aev06g3057	06	32136845	32140226	ECH