Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3055 ATGTCTTCAAGGGAACAAGCTCTTCAACAAAAGTTGCATCAACTTCGAGATGTCACCAAATCCAGTGCTCTAAACGAAGCCTCAATTATTGTGGACGCAACTAGATATATAGAGGAGTTGAAGCAAAAAGTGGAGGAGGGACTCAACTCAGAGCTTGAAATCGGTGAATCATCAACCACACAAATTCATGATGATAAACTACCAATGGTAACTGTGGGAACCCTAGAAAAGGGTTTCCTGATTAACGTGTATTCAGAAAATAACTGCCCTGGTATGTTGGTATCGGTACTCAAAGCCTTTGAAGAACTAGGACTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCATCTAAAAGCTGTGGGAGGAGAAAGTCACAAGAGGGACAGTACTATCGATGCGCAAGTTGTGAAGCAAGCAGTGTTGCAAGCAATCAAGAACAAGGACTAG 456 0.4232 MSSREQALQQKLHQLRDVTKSSALNEASIIVDATRYIEELKQKVEEGLNSELEIGESSTTQIHDDKLPMVTVGTLEKGFLINVYSENNCPGMLVSVLKAFEELGLDVLDARVSCEDTFHLKAVGGESHKRDSTIDAQVVKQAVLQAIKNKD* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3055 151 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 150 - -
Aev06g3055 151 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 150 - -
Aev06g3055 151 CDD ACT_UUR-ACR-like 80 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3055 Aev-Chr6 32099153 32103997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3055 8 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 27.083 2.35e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3055 - - gmx:100527466 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3055 06 32099153 32103997 Aev07g2178 07 22860182 22862204 ECH
Aev06g3055 06 32099153 32103997 Aev03g0971 03 8056572 8060459 ECH
Aev06g3055 06 32099153 32103997 Aev06g3055 06 32099153 32103997 ECH