Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2980 ATGAGGATGAAAGAAAGTGATTATGGATTAGAATGTTTCGAGGCAACTCATTATTCTAATAATTATCAAGATGGTAATTGTGATGATGATGAGAATAATAATAATAAGCAAAGCTCAAGTAATAGCACAGTGGAAGAGAATGAGAATAATAAGAAGAGTTCATCTTCATCAGTGAGGCCTTATGTTAGATCCAAGTTGCCAAGGCTACGTTGGACTCCTGATCTTCACCTTCGCTTTGTTCATGCTGTTCAAAGACTCGGAGGACAAGAGAGAGCAACACCAAAATTGGTTCTTCAATTGATGAATATCAAAGGTTTAAGCATTGCTCATGTCAAGAGTCATTTACAGATGTACAGGAGCAAGAAGGTAGATGACACAAATCAAGCATTAGCTGATCATAGGCTTCTTGTAGAAAGTGGAGACAGAAATGCTTACAATCATCTCAGCCAGCTTCCCATGTTTCAAGCCTATAATAATCCAAGCCAAAGTTCACCCTATAGATATGGATATGGGGGCGCTTCTCTTGGTGTCTATGAAAACATGATGCATAGGCCTTTCATGGGTCGAAGTTCAATAGAAGAATGTGGTTCCGGATTTTATAGCAAAATGGCTGAAAGGATCATCAATAAGAACAATTATAACATCAAATATTGGACGACACACAACATTTTTCAAGAAGATTCCTCCAATTTTGATGAACTATCAACAAGCCATGAACAAAAAAATCGTGATCAGTTCCTATCATTTGGTAGTGGGCATGAACCTTTATGCACAAACACAAGATTATTATTGAACCAAGTAATAAATAATAATCCTAAAGCTGAAGATGTCAATATTCCCAACAACAACAACAAATTGCTAGTAGCATCAAATCCATTATTGGAAATGAAGAAGTCCACTATGAAAAGAAAGGCTTGTTCAGATCATCATATTGACCTTGATTTGGATCTATCTCTTAAATTAAATTCAAGGGCGAATACTACTTTTGAGAACAAAGGAGTAGACCATAGCAATAATCTATTATCACTCTCTTTGTACTCTCAATCATCATCTTCATCATATCATAGCATAATAATGAAGGAAGAACAACATGAAGATCATAATAATCATTGTATGCAAGAGAAAAGGACAAGTGATGGTCCTAATTTGGATCTGACTATATGA 1164 0.3557 MRMKESDYGLECFEATHYSNNYQDGNCDDDENNNNKQSSSNSTVEENENNKKSSSSSVRPYVRSKLPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDDTNQALADHRLLVESGDRNAYNHLSQLPMFQAYNNPSQSSPYRYGYGGASLGVYENMMHRPFMGRSSIEECGSGFYSKMAERIINKNNYNIKYWTTHNIFQEDSSNFDELSTSHEQKNRDQFLSFGSGHEPLCTNTRLLLNQVINNNPKAEDVNIPNNNNKLLVASNPLLEMKKSTMKRKACSDHHIDLDLDLSLKLNSRANTTFENKGVDHSNNLLSLSLYSQSSSSSYHSIIMKEEQHEDHNNHCMQEKRTSDGPNLDLTI* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2980 387 Gene3D - 66 123 - -
Aev06g2980 387 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 67 122 IPR006447 GO:0003677
Aev06g2980 387 MobiDBLite consensus disorder prediction 366 387 - -
Aev06g2980 387 MobiDBLite consensus disorder prediction 23 59 - -
Aev06g2980 387 PANTHER - 24 387 - -
Aev06g2980 387 SUPERFAMILY Homeodomain-like 66 121 IPR009057 -
Aev06g2980 387 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 123 IPR017930 -
Aev06g2980 387 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 24 387 IPR044848 GO:0003700
Aev06g2980 387 Pfam Myb-like DNA-binding domain 69 119 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2980 Aev-Chr6 31467445 31470771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2980 58 146 G2-like Transcription Factor Family AT2G42660 58.654 1.37e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev06g2980 Myb_DNA-binding 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2980 - - gsj:114395715 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2980 06 31467445 31470771 Aev06g2980 06 31467445 31470771 ECH