Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2970 ATGATAATAACAAGCAACAAGGAGGAGAAAAAGGGTAGTAATAGTGCAATATTAGTAAAGAAGAAGAAAAACAAGGGAAAAGGAGTAGCAATAAAGCTTTCATCTGACCCACAAAGCGTAGCAGCAAGAGAAAGAAGGCACAGAATCAGTGATAGGTTCAAGATTCTACAGAGCATGGTCCCTGGTGGCACCAACATGAACACTGCTTCTATGTTGGAAGAAGCCATTCACTATGTCAAGTTTCTCAAGACCCAGATTTGGCTTCACCAAACCATGATTAACAACTCTGTCCTGTCCTCGGAGTTAATGAAAACAAACACTGTTGCCTAA 330 0.4061 MIITSNKEEKKGSNSAILVKKKKNKGKGVAIKLSSDPQSVAARERRHRISDRFKILQSMVPGGTNMNTASMLEEAIHYVKFLKTQIWLHQTMINNSVLSSELMKTNTVA* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2970 109 CDD bHLH_AtIND_like 34 93 - -
Aev06g2970 109 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 33 82 IPR011598 GO:0046983
Aev06g2970 109 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 10 95 IPR045843 GO:0003700|GO:0006355
Aev06g2970 109 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 39 91 IPR036638 GO:0046983
Aev06g2970 109 PANTHER TRANSCRIPTION FACTOR LAX PANICLE 1 10 95 - -
Aev06g2970 109 Gene3D - 36 107 IPR036638 GO:0046983
Aev06g2970 109 Pfam Helix-loop-helix DNA-binding domain 43 82 IPR011598 GO:0046983
Aev06g2970 109 SMART finulus 39 88 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2970 Aev-Chr6 31388603 31388932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2970 4 97 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43175 42.308 1.58e-22 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g2970 HLH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2970 - - psom:113359105 130.954