Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2938 ATGGAGGGTCACCACCATCAAAGACAACATCAAATACAACATGGGATTGTGAATGTTGGGGATGTCACAGATAGGTTCCCCCAATGGAGCATCCAAGAGACAAAAGAGTTCCTAATGATAAGAGCAGAGTTGGATCAAGCTTTCATGGAGACCAAGAGGAACAAACAGCTTTGGGAAGTTATATCGAACAAGATGAAGGACAAAGGTTACAATAGAAGCCCCGACCAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTACAAGGTATATGTTTAA 279 0.4337 MEGHHHQRQHQIQHGIVNVGDVTDRFPQWSIQETKEFLMIRAELDQAFMETKRNKQLWEVISNKMKDKGYNRSPDQCKCKWKNLVTRYKVYV* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2938 92 Pfam Myb/SANT-like DNA-binding domain 28 89 IPR044822 -
Aev06g2938 92 Gene3D - 29 90 - -
Aev06g2938 92 PANTHER - 13 90 - -
Aev06g2938 92 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-3A 13 90 IPR027759 GO:0003700|GO:0005634|GO:0006355|GO:0043565
Aev06g2938 92 CDD GT1 27 89 - -
Aev06g2938 92 ProSiteProfiles Myb-like domain profile. 29 85 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2938 Aev-Chr6 31104068 31104346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2938 4 89 Trihelix Transcription Factor Family AT2G38250 67.442 2.77e-36 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev06g2938 Myb_DNA-bind_4 2.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2938 - - aip:107628470 140.198