Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2937 ATGGCACAAGAAAATTTCAGAGTTACGTCACCGTTTCATATTGCATGGAAATTAGCGGCTGTGGTGGGCGGTCTCCGGTCATCTCGCGGAGATAACAGTGCACGGTTGGTGCAGTATCGACGGATACTGGATTTCATCTCTATGGATGGGTTCCGATGGACACCATATTCTGACATGGACGTGATGCAGATTGTTCCGGATCATGTCCAGCAGCACTCTGTGCTGTTTCGTTCAGTTATTCCCTTGCTTTCGTTCGAGATAGTAGAGTATCATCAGCCTGATCGTGTGTTGAGGCAGTTCCACATGATGCAGCATATCCCATCTCCTCCGGCTGACCTCAGCCGCGTTCATGGCATTGATGGAGAGGACGTCCCTCGAGATGGTGGCCGAGGGAGCACAGAGATTATTATGATATATGGGGAGATCGATACGATCGTGGTATATCTAGGCGGAGGTCCCCCTGGCCCAGACGAGATCCCTCCAGGGTTGCCTGATGGAGTTGGCCTTGGTGCAGGTCCTCAGATTCCACACCCACCAGCAGCCCCTGATAGGAGACGTGCACACACGAGAGCACGGACGGGCACACGTCAGAGCAGACGCCAGTACCCTATTGGGACTGCGGATGTGGGTGACTACTTTATTCCGCGCCAGACCCAGACTCAGACGCAGTCGCAGACTCGGTCGCAGTCCCGGACTAGTACCCAGATACCGCCGCAGTCCCAGTTGCCCCAGCAATCGCATGTCGCACCGGATACGCAGACAGAGATGCACTTTGAGACTAGGGTAGCTGCTGGAGGATCTATGTTTTTTGCTGGATTATCGTCAGATTGGAGGAGTGGTCCTGGGCAGAGCTCGCGCGATGCACTTGGATCGAGCTCGCGCGATGCACCTGGATCGAGCTCGCATGATGCAGCAGGGGGAGACAGTGATTGTTATAGGCCGACGATGGAGTCAGTGGACGATATTGGTATATCCATCACTGATGATGATCTTGATATGTTTGATGCATATCTTCGTCGACAGCTCCATAGTGGTGAACCTATTCCTTACAATGTAACGGTGGTACGGATAAGATCGGAAATTGAAGAAAAAACTGAACTTACACCGACATTTGCACAAAAATATCGAAGACGATTACCTAGTCAAATCAAATTGAAAACTACGTCCGGAAAAGAATGGCAAATAAAATGTGCAAAAAGAGGTGACAAGGTATGGTTCACAGACGGTTGGAAGGATTTTGTACAACATTTTTCAATGTGTTATGGTTACACGGTATGGCTCCACTATGATGAAGAAAATATATTTGACGTTGAGATATTTGACGAAAATGAGGTTGAAGTCTCGTACGACTCTGAAGGAGATGAAGGAGACAGTAGTTTAGCTGACGACTAA 1392 0.495 MAQENFRVTSPFHIAWKLAAVVGGLRSSRGDNSARLVQYRRILDFISMDGFRWTPYSDMDVMQIVPDHVQQHSVLFRSVIPLLSFEIVEYHQPDRVLRQFHMMQHIPSPPADLSRVHGIDGEDVPRDGGRGSTEIIMIYGEIDTIVVYLGGGPPGPDEIPPGLPDGVGLGAGPQIPHPPAAPDRRRAHTRARTGTRQSRRQYPIGTADVGDYFIPRQTQTQTQSQTRSQSRTSTQIPPQSQLPQQSHVAPDTQTEMHFETRVAAGGSMFFAGLSSDWRSGPGQSSRDALGSSSRDAPGSSSHDAAGGDSDCYRPTMESVDDIGISITDDDLDMFDAYLRRQLHSGEPIPYNVTVVRIRSEIEEKTELTPTFAQKYRRRLPSQIKLKTTSGKEWQIKCAKRGDKVWFTDGWKDFVQHFSMCYGYTVWLHYDEENIFDVEIFDENEVEVSYDSEGDEGDSSLADD* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2937 463 Pfam Plant mobile domain 32 109 IPR019557 -
Aev06g2937 463 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR VRN1-LIKE 354 455 - -
Aev06g2937 463 SMART B3_2 351 443 IPR003340 GO:0003677
Aev06g2937 463 MobiDBLite consensus disorder prediction 213 253 - -
Aev06g2937 463 MobiDBLite consensus disorder prediction 151 253 - -
Aev06g2937 463 MobiDBLite consensus disorder prediction 277 299 - -
Aev06g2937 463 Gene3D - 351 444 IPR015300 -
Aev06g2937 463 ProSiteProfiles B3 DNA-binding domain profile. 350 443 IPR003340 GO:0003677
Aev06g2937 463 PANTHER B3 DOMAIN-CONTAINING 354 455 - -
Aev06g2937 463 CDD B3_DNA 371 441 IPR003340 GO:0003677
Aev06g2937 463 Pfam B3 DNA binding domain 367 441 IPR003340 GO:0003677
Aev06g2937 463 SUPERFAMILY DNA-binding pseudobarrel domain 362 443 IPR015300 -
Aev06g2937 463 MobiDBLite consensus disorder prediction 274 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2937 Aev-Chr6 31095873 31100059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2937 359 453 B3 DNA Binding Superfamily AT3G18990 33.333 4.09e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev06g2937 B3 7.9e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2937 - - aprc:113870433 84.7297