Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2935 ATGGGCCTCATGGACGTGACAGCAGACACTACGGAAAGTGAGCATGTAGTGGTCGCAGATGGTGCAGAGGAAGCACCTTCTGGTCATGAAGATAGAAATTCAGACATTACAGCAACAATCTTCCAAAACTCAGGAAATCGGAATTCCAAGCTGAAGGGTGGGTTTGAAAAGTCACAGCAATTGTGGCTGTTTACTGATTCTTGGAAGAACAAGCTTTCGATTTCCATTGGGAAATTGAAGTTTCTACTTGCACCCGACGAAACATTCATGGCTGATTCAGACACGATTAACGATGACATATCGAAGATTCCAGCGCTGGGAACCGACGATGATGCTCCTAATGATGTAGAAGATGATGTGAAATTCAGTTCTAGAGACCAAAGAGAGGCTCTCCCAGGTGAGCCCAAGTGTGTTATATGCGGCCGATACGGCGAGTACATTTGTGATGAAACTGATGATGATATTTGCAGTTTGGAATGTAAACAGTTACTACTGAGCAGAATTGCCAGACCCTTACCTCCTCCAGCTGGTGGAGGCCTTCTGCCACCCAAAAAGCTACCTGCAGCTGATGAGTGCTTTTATGTTAGGGACGGCGGTTGTGAATCCGGAACTTCATCTTTAGCTAGGGATCAGGTTGAATTCCTTAGAAAGAAACTTGACATTCATGTGAAGGGTGATGTAGTTGGGCCGGTTTTATCATTCGCTTCCTGTAACCTCCCGGATAAGCTACTCCACAATATAGAAGCAGCAGGGTATGACATGCCCACACCTGTCCAGATGCAAGCAATCCCTGCTGCCTTGTCAGGCAAAAACATGCTTGTTTTGGCTGATACAGGATCCGGAAAGTCTGCTTCATTTCTTATTCCGATAGTTTCTCGTTGTGTGAGCCATCGCCTTGCTTTTGTTTCGGATAAGAAGCCTTTGGCTATTGTGCTAACACCTACCAGAGAGCTTTGCATTCAGGTTGAAGATCATGCGAAATTGCTCGGAAAGGGGTTACCTTTCAAAACTGCACTTGTGGTTGGTGGTGATGCCATGGCTGGACAACTATACCGCATTCAGCAAGGAGTGGAGTTGATTGTGGGAACCCCGGGAAGGCTTGTTGATCTTTTAACGAAGCATGAGATTGACTTAGATGATGTGACGACTTTTGTTGTGGATGAAGTGGACTGTATGCTGCAAAGGGGTTTCAGAGATCAGGTCATGCAGATATACAGGGCTCTCTCACAACCGCAGGTCTTGATGTATTCTGCAACAATGTCGAATGATTTAGAAAAGATGGCAAACTCTCTGGCAAATGGTACAGTGGTTGTCTCTGTTGGGAAACTGAATAGCCCAAATAAGGCTGTTAAACAGGTAGCTATTTGGGTCGAGTCAAAGCAAAAGAAGCAGAAGCTGTTTGACATATTGGTGAGTAAGCAACATTTTAAGCCACCTGTTGTAGTATATGTGAGCTTGAGACTCGGAGCAGATCTCCTGGCAAACGCGATTACAGTTTCCACAGGAATTAAGGCAAATTCAATTCATGGAGAGAAGCCTATGAAGGAAAGAAGAGAAATAATGCGGTCATTCTTGGTCGGTGAGGTTCCAGTGGTTGTGGCTACTGGAGTTTTGGGTAGGGGGGTTGATCTGTTGGGCGTAAGACAGGTAATCGTGTTTGACATGCCCAATTCCATCAAAGAGTACATACATCAAATTGGAAGGGCATCTAGAATGGGAGAGGAAGGTCAAGCCATAGTTTTTGTGAACGAGGAGAATAAGAATGTCTTTGCAGATTTAGTTGATGTTTTAAAATCTGGTGGAGCAGCTATACCTCGTGAACTTGCCAATTCACGGTATACCACTGGATTTTTCTCTGGTGGTAAGGGTTCAAAGAAGAGAAAGCAGAGATGA 1893 0.4485 MGLMDVTADTTESEHVVVADGAEEAPSGHEDRNSDITATIFQNSGNRNSKLKGGFEKSQQLWLFTDSWKNKLSISIGKLKFLLAPDETFMADSDTINDDISKIPALGTDDDAPNDVEDDVKFSSRDQREALPGEPKCVICGRYGEYICDETDDDICSLECKQLLLSRIARPLPPPAGGGLLPPKKLPAADECFYVRDGGCESGTSSLARDQVEFLRKKLDIHVKGDVVGPVLSFASCNLPDKLLHNIEAAGYDMPTPVQMQAIPAALSGKNMLVLADTGSGKSASFLIPIVSRCVSHRLAFVSDKKPLAIVLTPTRELCIQVEDHAKLLGKGLPFKTALVVGGDAMAGQLYRIQQGVELIVGTPGRLVDLLTKHEIDLDDVTTFVVDEVDCMLQRGFRDQVMQIYRALSQPQVLMYSATMSNDLEKMANSLANGTVVVSVGKLNSPNKAVKQVAIWVESKQKKQKLFDILVSKQHFKPPVVVYVSLRLGADLLANAITVSTGIKANSIHGEKPMKERREIMRSFLVGEVPVVVATGVLGRGVDLLGVRQVIVFDMPNSIKEYIHQIGRASRMGEEGQAIVFVNEENKNVFADLVDVLKSGGAAIPRELANSRYTTGFFSGGKGSKKRKQR* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2935 630 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 263 438 IPR014001 -
Aev06g2935 630 Pfam HIT zinc finger 135 161 IPR007529 -
Aev06g2935 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 440 IPR027417 -
Aev06g2935 630 Gene3D - 440 614 IPR027417 -
Aev06g2935 630 Pfam DEAD/DEAH box helicase 256 426 IPR011545 GO:0003676|GO:0005524
Aev06g2935 630 SMART ultradead3 251 453 IPR014001 -
Aev06g2935 630 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 232 260 IPR014014 GO:0003724
Aev06g2935 630 CDD SF2_C_DEAD 450 582 - -
Aev06g2935 630 SMART helicmild6 491 573 IPR001650 -
Aev06g2935 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 378 587 IPR027417 -
Aev06g2935 630 Gene3D - 201 439 IPR027417 -
Aev06g2935 630 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 449 612 IPR001650 -
Aev06g2935 630 PANTHER ATP-DEPENDENT RNA HELICASE DDX59-RELATED 116 615 - -
Aev06g2935 630 Pfam Helicase conserved C-terminal domain 464 573 IPR001650 -
Aev06g2935 630 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 116 615 - -
Aev06g2935 630 Gene3D - 117 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2935 Aev-Chr6 31066440 31076659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2935 226 610 Eukaryotic Initiation Factors Gene Family AT3G19760 27.949 1.77e-54 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2935 K19466 - gmx:100781473 822.002