Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2929 ATGGGCGTGGACTACTACAAGGTTCTTCAAGTCGATAGAACCGCCAAAGACGATGATCTCAAGAAAGCTTATCGAAAGCTTGCCATGAAGTGGCACCCTGACAAGAACCCTAACAACAAGAAACAAGCCGAAGCTAAATTCAAGCAAATTTCCCAAGCCTATGATGTTTTGAGTGATCCACAGAAGCGTGCAGTGTATGATCAATATGGTGAGGAGGGGTTGAATGGGCAGGTACCACCACCGGGTGCCGGCGGTTTCCCCGGTGGGGGTGATGGCAGGGCGACATCATTCCGGTTCAACACCAGAAGTGCAGATGATATATTTTCGGAGTTTTTCGGGTTTTCCGGTCCATTTGGTGGAATGGGGGATACAGGGGGCCATGCTGGTGCCTCTGGCTTTTCCCGGGGCGGCATGTTTGGTGAAGATATCTTTGCTCAATTTAGGGGTGGAGCCGGAGAGGGATCTGCCCATATGCCAAGGAAAGGTGCTCCCATAGAGAAGACATTGCAATGTAGCTTGGAGGATTTGTATAAAGGGACAACAAAGAAAATGAAGATTTCAAGGGATGTTAGTGATGCCAGTGGAAGGCCCACCACAGTAGAGGAAATCCTTACAATTGAGATCAAGCCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCACAAAAGGGAAACGAACAGAGAGGAGTTATACCATCAGACCTTGTCTTTATTATCGATGAGAAGCCTCATGGCGTCTTCAAGAGGGATGGAAATGACCTTATTGTCACCCAGAAGATATCCCTTGTAGAAGCCCTGACGGGTTACACGGTGCAGCTGACGACCCTTGACGGGCGGAATCTTACCATCCCCGTTAACACGGTCATTAGTCCTACATATGAAGAAGTTGTAAAAGGGGAGGGCATGCCTATTGCCAAAGAACCTTCCAAGAAGGGTAACTTGAGAATAAAATTCAGTGTCAAGTTTCCCTCCAAGCTTACATCAGAGCAGAAAAGTGGCATTATGCGATTACTCACATCATTATAA 1026 0.4698 MGVDYYKVLQVDRTAKDDDLKKAYRKLAMKWHPDKNPNNKKQAEAKFKQISQAYDVLSDPQKRAVYDQYGEEGLNGQVPPPGAGGFPGGGDGRATSFRFNTRSADDIFSEFFGFSGPFGGMGDTGGHAGASGFSRGGMFGEDIFAQFRGGAGEGSAHMPRKGAPIEKTLQCSLEDLYKGTTKKMKISRDVSDASGRPTTVEEILTIEIKPGWKKGTKITFPQKGNEQRGVIPSDLVFIIDEKPHGVFKRDGNDLIVTQKISLVEALTGYTVQLTTLDGRNLTIPVNTVISPTYEEVVKGEGMPIAKEPSKKGNLRIKFSVKFPSKLTSEQKSGIMRLLTSL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2929 341 SUPERFAMILY Chaperone J-domain 3 120 IPR036869 -
Aev06g2929 341 SMART dnaj_3 3 62 IPR001623 -
Aev06g2929 341 CDD DnaJ 4 59 IPR001623 -
Aev06g2929 341 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Aev06g2929 341 Gene3D - 244 324 - -
Aev06g2929 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 165 244 IPR008971 GO:0006457|GO:0051082
Aev06g2929 341 MobiDBLite consensus disorder prediction 71 97 - -
Aev06g2929 341 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 339 - -
Aev06g2929 341 Gene3D - 164 242 - -
Aev06g2929 341 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 339 - -
Aev06g2929 341 Gene3D DnaJ domain 3 125 IPR036869 -
Aev06g2929 341 Pfam DnaJ domain 4 67 IPR001623 -
Aev06g2929 341 CDD DnaJ_C 163 326 - -
Aev06g2929 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 246 332 IPR008971 GO:0006457|GO:0051082
Aev06g2929 341 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Aev06g2929 341 Pfam DnaJ C terminal domain 165 323 IPR002939 -
Aev06g2929 341 PRINTS DnaJ domain signature 62 81 IPR001623 -
Aev06g2929 341 PRINTS DnaJ domain signature 24 39 IPR001623 -
Aev06g2929 341 PRINTS DnaJ domain signature 6 24 IPR001623 -
Aev06g2929 341 PRINTS DnaJ domain signature 42 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2929 Aev-Chr6 30962128 30965897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2929 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 1.32e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2929 K09510 - gmx:100818358 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2929 06 30962128 30965897 Aev06g2929 06 30962128 30965897 ECH
Aev06g2929 06 30962128 30965897 Aev02g1846 02 20284577 20286934 PCT