Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2917 ATGGGGTCTCACCAACAACAACAACAACAAGACCAGCCATGGCTGATGGAGAATGGGAACATGAAGGTGCTGACAAAGGAAATGAGACATGGGAGAACAGCACACAACATGTCATCATCCTCGTTGAGGAAGAAATCTGATAGGACACTTGTGTCCAAAGTGAGGTGTGGTTTGCTTAGGAACTTGTTGGTGAATTTCCAAGAGGTCATTCTTGGTACCAAGTTGTCTATTTTGTTCCCTGCTATCCCTGCTGCCATCATTGCTCAAACCTGTGGTCTTGCAAGGCCATGGGTTTTTGCACTGAGCTTACTTGGGCTTACACCACTTGCTGAGCGTGTTAGCTTCCTCACAGAACAAGTTGCTTATTACACAGGTCCAACAGTGGGAGGGCTTCTAAATGCAACATGTGGGAATGTAACTGAGCTGATAATAGCAATATTTGCACTTAGCAATAACAAAATAGCTGTGGTCAAATACTCTCTCTTGGGTTCTGTGCTCTCAAACCTCCTTCTGGTTCTTGGAACCTCTCTCTTCTGTGGTGGCATTGCAAACCTTGGACTTGAACAAAAATATGACAGAAGACAAGCAGATATGAACTCACTTATGCTGCTTCTGGCATTGTTGTGCAACTTGCTTCCAATGCTGTTCAGCTATGGCGGCGGCGTCTCTGCCGCTCTCGCCGCCGACGCGTCGCTGCACTTGTCCAGAGCTGCTAGCATTACAATGCTGATTGCATATTTTGCTTACCTTATCTTTCAACTTTGGACACATAGGCAATTATTTGAAGCTGAAGATGAGGATGGAGATGGTGACAATGGTTCAGATGAAGAAGCTGTGATTGGATTCTGGAGTGGCATTTCTTGGCTGGTTGGGATGACTGTCTTCATTGCTTTGTTGTCTGAATATGTGGTGGACACAATTGAGGATGCATCAGATACATGGGGTCTATCAGTTAGCTTCCTCAGCATAATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCTGGAGCAATTATTTTTGCTTTCAAGAACAAGCTGGACATTTCGTTGGGTGTTGCATTAGGCTCTGCCACTCAAATTGCCATGTTTGCGGTTCCTCTGTGTGTGCTGGTTGCTTGGATAATGGGTGTTGACATGGACTTGAACTTCAATCTCATGGAGACAGGTTCTCTTGCTTTGGCAATAATAGTCACAACCTTCACTTTACAGGATGGTACTTCTCACTACATGAAAGGCCTTGTTCTTCTCCTCTGCTACATTGTCATAGGGGCTTGCTTCTTTGTACAAAGAACACCATCAAACTCGGAGAATGTAACCAACATCACACTTAAATCAGCAACTGATGCAGTTTTAAGCGTTTAG 1365 0.4462 MGSHQQQQQQDQPWLMENGNMKVLTKEMRHGRTAHNMSSSSLRKKSDRTLVSKVRCGLLRNLLVNFQEVILGTKLSILFPAIPAAIIAQTCGLARPWVFALSLLGLTPLAERVSFLTEQVAYYTGPTVGGLLNATCGNVTELIIAIFALSNNKIAVVKYSLLGSVLSNLLLVLGTSLFCGGIANLGLEQKYDRRQADMNSLMLLLALLCNLLPMLFSYGGGVSAALAADASLHLSRAASITMLIAYFAYLIFQLWTHRQLFEAEDEDGDGDNGSDEEAVIGFWSGISWLVGMTVFIALLSEYVVDTIEDASDTWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAMFAVPLCVLVAWIMGVDMDLNFNLMETGSLALAIIVTTFTLQDGTSHYMKGLVLLLCYIVIGACFFVQRTPSNSENVTNITLKSATDAVLSV* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2917 454 Pfam Sodium/calcium exchanger protein 288 423 IPR004837 GO:0016021|GO:0055085
Aev06g2917 454 Pfam Sodium/calcium exchanger protein 97 255 IPR004837 GO:0016021|GO:0055085
Aev06g2917 454 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 8 441 IPR004713 GO:0006812|GO:0008324|GO:0016021
Aev06g2917 454 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 8 441 - -
Aev06g2917 454 TIGRFAM caca2: calcium/proton exchanger 61 428 - -
Aev06g2917 454 TIGRFAM cax: calcium/proton exchanger 81 428 IPR004798 GO:0006816|GO:0015369
Aev06g2917 454 Gene3D - 126 269 IPR044880 -
Aev06g2917 454 Gene3D - 272 428 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2917 Aev-Chr6 30846238 30852066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2917 12 435 Antiporters AT2G38170 69.444 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2917 K07300 - gmx:100779440 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2917 06 30846238 30852066 Aev06g2917 06 30846238 30852066 ECH
Aev06g2917 06 30846238 30852066 Aev02g1836 02 20160556 20165912 PCT