Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2912 ATGGGGTTTGGTTTCAAAAGAAGGAAGAAGGAACAGGAAGAAGAGGAAGTTATTGGTGGTGGAGGAGGAGAGATGCGAAAGTCTTTCAAGGATTCGCTCAAAGCTCTTGAAGCTGACATTCAATTTGCCAATACACTTGCTTCTGAATATCCAAGCGATCGTGATGGTTCTTGCCTCCAAATGAGGTTGTCTTACAGTCCTGCTGCTCAATTTTTCCTTTTTCTGGTTCAATGGACTGATTGTCACCTAGCAGGAGCCTTGGGATTGCTTAGAATTCTTATATACAAGGCCTATGCGGATGGCAAGACAACCATGTCCATTTATGAAAGAAAAGCCAGCCTGAAGGAGTTCTATCGTGTGGTCTTTCCCTCTTTGTTGCAACTAAACAGAGGAATCACTGATGTTGAAGACAGGAAACAAAAGCATGTATGCGCTACTAAGTACAAGCCGAAAGAGATAACATGCAAGGGAAAGCTGTCTGAGATCGACATGGAGAGAGAAGAAGAGTGTGGTATTTGCATGGAGATGAACGACAAGGTTGTATTGCCAAATTGCAATCACTCGATGTGTATGAAATGCTACCGAGACTGGCGTGCAAGATCTCAGTCATGCCCTTTCTGTCGAGACAGTCTCAAAAGAGTAAACTCTGGTGACCTTTGGATCTACATGAACAGCAGTGAGATAGATGATTTGGCTTCAATCAACAAGGAGAATTTGAAGAGACTATTCATGTACATAGAAAAGTTGCCCCTTGTTGTGCCAGATCCTGTATTTGTGTCGTATCGCCATCGATGGTGA 798 0.4323 MGFGFKRRKKEQEEEEVIGGGGGEMRKSFKDSLKALEADIQFANTLASEYPSDRDGSCLQMRLSYSPAAQFFLFLVQWTDCHLAGALGLLRILIYKAYADGKTTMSIYERKASLKEFYRVVFPSLLQLNRGITDVEDRKQKHVCATKYKPKEITCKGKLSEIDMEREEECGICMEMNDKVVLPNCNHSMCMKCYRDWRARSQSCPFCRDSLKRVNSGDLWIYMNSSEIDDLASINKENLKRLFMYIEKLPLVVPDPVFVSYRHRW* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2912 265 SMART ring_2 170 207 IPR001841 -
Aev06g2912 265 MobiDBLite consensus disorder prediction 1 25 - -
Aev06g2912 265 PANTHER RING FINGER PROTEIN 41, 151 16 253 - -
Aev06g2912 265 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 217 IPR013083 -
Aev06g2912 265 SUPERFAMILY RING/U-box 159 213 - -
Aev06g2912 265 ProSiteProfiles Zinc finger RING-type profile. 170 208 IPR001841 -
Aev06g2912 265 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 16 253 - -
Aev06g2912 265 ProSitePatterns Zinc finger RING-type signature. 185 194 IPR017907 -
Aev06g2912 265 Pfam Zinc finger, C3HC4 type (RING finger) 167 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2912 Aev-Chr6 30791612 30795201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2912 145 227 C3H Transcription Factor Family AT3G06140 37.079 5.42e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2912 K25840 - pop:7466068 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2912 06 30791612 30795201 Aev06g2912 06 30791612 30795201 ECH