Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2904 ATGATTGCTAATTGTTTTGGTACCTTGAATTGGTGCAAAGGGAAGGATGATCCTGCTAGTCAGCCACATGAACAAGTGATTGCGACTAAAAAGTTTAGCTATAACTCGTTGAAATCAGCAACTGGAGATTTTCATCCATCAAGCAAAATTGGTGGAGGAGGTTATGGAGTTGTCTACAAGGGAGTCTTAAGAGATGGTACTCAAGTTGCTATCAAGTCTCTTTCTCTAGAGTCTAAACAAGGAACCCATGAATTTATGACAGAAATAGATATGATCTCAACTATTCGGCATCCAAATCTTGTGGAACTAATTGGCTGCTGTGTTGAGGGTAGCCATCGAATATTGGTGTACGAATTTCTGGAGAACAATAGCCTTGCGAATTCTTTGCTAGGTTCCAGAAGTAAATATGTTGCTCTGGATTGGCCAAAGAGGGCTTCTATTTGCCGAGGTACCGCTTCGGGTCTTAGGTTTCTTCATGAAGAGGCTGAACCAAACATTGTTCACAGAGATATCAAGGCCAGCAACATACTACTGGATTGCAACTTCAATCCAAAAATCGGGGATTTCGGTCTCGCAAAGCTTTTTCCGGACAATGTCACCCATGTTAGTACTCGAGTTGCAGGAACTGTGGGATATCTTGCACCAGAATATGCTCTTCTAGGACAGCTTACAAAGAAAGCAGATATGTACAGTTTTGGAGTTCTCATGCTTGAAATAGTCAGTGGTAAAAGTAGTAGCAAAGCTGCATTTGGAGATAATCTTTTGGTTCTGGTGGAATGGGTGTGGATGCTGAAAGAAGAAAACAGGCTTCTGGACATTGTTGATCCAGAACTAACCGAATACGACGAAAGTGAAGTCTTACGGTTCATTAAGGTTGCTCTGTTTTGCACCCAAGCTTCTGCTCACCATAGACCCACCATGAAGCAAGTGCTGCAAATGCTCTCAAAGGAAGTTCATCTTAATGAGAAGGCACTGACTGAGCCTGGAATATACAGATGGTACTCTGGAAAGAAGGGAAGTTCTATGAATGAGACATCCTCTTCTCAACCATTAAGGAACATTAAATCGATGAACTTTAGTGGTAACGATATCGTGACAGAGATGCTTCCCAGATAG 1116 0.4194 MIANCFGTLNWCKGKDDPASQPHEQVIATKKFSYNSLKSATGDFHPSSKIGGGGYGVVYKGVLRDGTQVAIKSLSLESKQGTHEFMTEIDMISTIRHPNLVELIGCCVEGSHRILVYEFLENNSLANSLLGSRSKYVALDWPKRASICRGTASGLRFLHEEAEPNIVHRDIKASNILLDCNFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADMYSFGVLMLEIVSGKSSSKAAFGDNLLVLVEWVWMLKEENRLLDIVDPELTEYDESEVLRFIKVALFCTQASAHHRPTMKQVLQMLSKEVHLNEKALTEPGIYRWYSGKKGSSMNETSSSQPLRNIKSMNFSGNDIVTEMLPR* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2904 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Aev06g2904 371 Gene3D Phosphorylase Kinase; domain 1 12 119 - -
Aev06g2904 371 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Aev06g2904 371 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g2904 371 Pfam Protein kinase domain 45 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g2904 371 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 360 - -
Aev06g2904 371 Gene3D Transferase(Phosphotransferase) domain 1 120 328 - -
Aev06g2904 371 CDD STKc_IRAK 63 316 - -
Aev06g2904 371 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 360 - -
Aev06g2904 371 SUPERFAMILY Protein kinase-like (PK-like) 22 314 IPR011009 -
Aev06g2904 371 SMART serkin_6 44 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2904 Aev-Chr6 30728765 30733142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2904 5 332 Receptor kinase-like Gene Family AT1G53420 49.850 3.21e-107 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aev06g2904 Pkinase 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2904 - - gmx:100816683 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2904 06 30728765 30733142 Aev06g2904 06 30728765 30733142 ECH