Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2844 ATGTCAACTTCGGAGATGTCTCATGTTGTTGATTTAGAGCAAGGGAACCATCGACGCTCTGCTGCTGGAAGTGATGTGACTGCAGAAGAAGCGAGCGTGTGCTTCTCTGATGGAGATGAAGGGTCCTTACACTCTCGTTTCTACTCAACAAACGGTGCCTCTTCTGATCCTGAGGCTTGTGATGGTGATGGTGGTGTTGGTGTTGCTGCTTCTAGGAGGGCCTCTTGTGTCAGTGATTGTTCTGTGGAGCTAGGAAGTGCTGGAAATGGAATAGGGGTTCCTGAGATCAAGGTGCATTTGGACAAAATTGAGAGGGATTGTAGGATTTGTCATATGGGTTTGGAGAGTGAGAGTCATGAGCATGGTGTTCCAATTGAGTTGGGTTGTTCCTGCAAGGATGATCTTGCTGCTGCTCACAAGCTCTGTGCTGAGGCCTGGTTCAAGATTAAGGGTAACAGGACCTGTGAAATTTGTCATTCTGTGGCGCGGAATGTATTTGGCGGAAATGAGGATTCAACTGCGAATTCGCGAGACAACAACAATGCTACCATGGCATCTGTTTTTTCAGCAGCGGCTCCTTCAGTAGAAGCTCGAAGATTTTGGCATGGCCATCGCTTCCTGAATTTTCTGCTCGCTTGTATGGTTTTCGCATTTGTCATATCATGGCTTTTCCATTTCAATGTGCCGTCATAG 693 0.4719 MSTSEMSHVVDLEQGNHRRSAAGSDVTAEEASVCFSDGDEGSLHSRFYSTNGASSDPEACDGDGGVGVAASRRASCVSDCSVELGSAGNGIGVPEIKVHLDKIERDCRICHMGLESESHEHGVPIELGCSCKDDLAAAHKLCAEAWFKIKGNRTCEICHSVARNVFGGNEDSTANSRDNNNATMASVFSAAAPSVEARRFWHGHRFLNFLLACMVFAFVISWLFHFNVPS* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2844 230 MobiDBLite consensus disorder prediction 1 25 - -
Aev06g2844 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 167 IPR013083 -
Aev06g2844 230 Pfam RING-variant domain 107 158 IPR011016 GO:0008270
Aev06g2844 230 SUPERFAMILY RING/U-box 104 162 - -
Aev06g2844 230 CDD RING_CH-C4HC3_MARCH 107 159 - -
Aev06g2844 230 PANTHER ZINC FINGER, RING-CH-TYPE 3 230 - -
Aev06g2844 230 SMART ringv_2 106 159 IPR011016 GO:0008270
Aev06g2844 230 ProSiteProfiles Zinc finger RING-CH-type profile. 99 165 IPR011016 GO:0008270
Aev06g2844 230 PANTHER OS01G0850200 PROTEIN 3 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2844 Aev-Chr6 30123853 30127096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2844 60 230 C3H Transcription Factor Family AT5G05830 56.522 5.20e-64 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2844 - - gmx:100808666 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2844 06 30123853 30127096 Aev07g2378 07 24508346 24510481 ECH
Aev06g2844 06 30123853 30127096 Aev06g2844 06 30123853 30127096 ECH