Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2837 ATGAAGAATAAGCTTCTAACAATCAATTTTTGTGTGGGTTACATATTGGAAGGTCACCGGAAAAGAACACTTTATGATCAAATGTCAGCTTGGGATAGCAGGCGACAATCGCTAGCTGGCTTGACCCTTGATGACGTCTTAGCCAATCAGAAGAAAATCAACGAGACAGCACAGCAAAGCCAACTTTGCCAACAAATAGTACCCAGGTTCAGGAACCGGACCCTCCTAGACATCATCAAAGAAGACGAGAGCAACAAGAAGGATCGCAGGTCGTGGAAAGCTTTCAAGGACAAGCTTCGGCTCAAGCGTGCCGGCTCTGCCTGGATATCGACAATTGGCGTTCCCACCTCCGATATCCTTATCTCACATCCAAACAGCACAACTTTCACCCCCTTCGGTCGCCGCAACTCGGTCCGTCAGACTCACTCCATCTCGGCCGCGCCAACTCACTACATGGCCAACGAACCCTACGACTTCGACCCCAGTGACTCCCCTCCGCCGGCATCAGCGGCGGCGCCCAAGCCCCAGTTCGCTCGGCGGACCTCCACCCGTTTCAGTTCCGCCGCCGATGCTCCCTTCACAGCCGGCGACCCCACCGAACCCGCACCCCCCGGCGGCCTTCGACCGCAGCTGTCGCGGCGGAACTCCACCAACGTTCCGTCGGCGTCGGAGCCATTCCGGCGAGGGCGCGTAGTGACCTTCCGGGACAGCATGGATGATGACGAGCCGGAGGATGAAGAGGGCCTGCATGCTGGGAGGGCGCTGTCAGCGAGGGAGGCCGTGGCGGCGCAGGAGGCAGCGGAGGCGGCGGCTGCAGCGGAGAGAGAGTCGGAGGAAGAGGCGGGGCCTGTGACGATGTCGCTGATGGACCTGCTGTCGGAGACGGATAGGGAGATGGGACTTGAAGGGTCACGGTACATATTGAGCGATGACGAGGATTTTTATGATGATGATGAGGAAGATGATGAAGGGCAAGAAGGTGTTGGTGGAATGGGTGAGATGGAATATACTTGCTCTGTTTGTATGGTTAGGCATAAGGCTAGTTCTGTCAGCCATTGTGGCCACTCCTACTGCAGGATGTGCTCCAGGGAGCTTTCGGTTACCAAGGGTAACTGCCCTCTCTGCAACAATTTCATTTCCGAGATTATAGAAATCTTCTGA 1161 0.5599 MKNKLLTINFCVGYILEGHRKRTLYDQMSAWDSRRQSLAGLTLDDVLANQKKINETAQQSQLCQQIVPRFRNRTLLDIIKEDESNKKDRRSWKAFKDKLRLKRAGSAWISTIGVPTSDILISHPNSTTFTPFGRRNSVRQTHSISAAPTHYMANEPYDFDPSDSPPPASAAAPKPQFARRTSTRFSSAADAPFTAGDPTEPAPPGGLRPQLSRRNSTNVPSASEPFRRGRVVTFRDSMDDDEPEDEEGLHAGRALSAREAVAAQEAAEAAAAAERESEEEAGPVTMSLMDLLSETDREMGLEGSRYILSDDEDFYDDDEEDDEGQEGVGGMGEMEYTCSVCMVRHKASSVSHCGHSYCRMCSRELSVTKGNCPLCNNFISEIIEIF* 387
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2837 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 312 386 IPR013083 -
Aev06g2837 386 MobiDBLite consensus disorder prediction 152 285 - -
Aev06g2837 386 SUPERFAMILY RING/U-box 337 382 - -
Aev06g2837 386 Pfam Zinc finger, C3HC4 type (RING finger) 336 381 - -
Aev06g2837 386 CDD RING-HC 338 375 - -
Aev06g2837 386 PANTHER OS01G0917900 PROTEIN 20 386 - -
Aev06g2837 386 PANTHER OS01G0917900 PROTEIN 20 386 - -
Aev06g2837 386 ProSiteProfiles Zinc finger RING-type profile. 338 376 IPR001841 -
Aev06g2837 386 SMART ring_2 338 375 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aev06g2837 Aev-Chr6 30045476 30047373 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2837 28 386 C3H Transcription Factor Family AT3G07120 37.270 1.17e-50 172
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2837 - - gmx:100795449 355.14