Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2831 ATGGGTGGAGTTGCATGGACAGAGGAAGAAGATCACCTGCTTAAGAAATGCATACAGCAATATGGAGAAGGAAAATGGCACAGGGTTCCTCTCTTGGCTGGTCTAAACAGGTGCCGGAAGAGTTGCAGGCTAAGATGGCTGAACTATCTCCGCCCCAACATCAAAAGAGGAAGCTTTGCAGAAGAAGAAGTGGAGATGATTGTCAAACTCCACAAATTATTGGGTAACAGGTGGTCACTAATTGCAGGAAGGCTACCAGGAAGGACTGCCAATGACGTGAAGAACTATTGGAACTGTCATCTGAGCAAAAGACTGAATGCTCTAGAAGCTGAAGACAGACAAGTTACAAAGAATAATGTTGAAGTCATTAGGCCTCAGCCTAGAAACATTGGTTCAAGCTCAGTGAAGAGAAGGAGCATACTGCAGAGTGAGTCAGTTATAACTGACCAGGGAACTCAACAAGAGATTAGTGGAATCTCTTCCATGACATTTGATGCTGAATCACAGAGCCATGTGTTTGAATCACAGCAAGATAACAATAACAACATATATTCGTGCTTGGACCAGCAAGGCGTTGTTGGTGAGTTGCCAATAATGGATTTTCAATTCGAAGGGGTCGAAGCGATCATCAGTGGAGAGGGAAATAGCAGCCAATGGGATTGGGATGATTTGCTCTTAGATATGGACTTGTATAAAGAGTTTGCTTCTTAG 711 0.436 MGGVAWTEEEDHLLKKCIQQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGSFAEEEVEMIVKLHKLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKRLNALEAEDRQVTKNNVEVIRPQPRNIGSSSVKRRSILQSESVITDQGTQQEISGISSMTFDAESQSHVFESQQDNNNNIYSCLDQQGVVGELPIMDFQFEGVEAIISGEGNSSQWDWDDLLLDMDLYKEFAS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2831 236 Gene3D - 58 124 - -
Aev06g2831 236 Pfam Myb-like DNA-binding domain 5 50 IPR001005 -
Aev06g2831 236 Pfam Myb-like DNA-binding domain 56 98 IPR001005 -
Aev06g2831 236 SMART sant 2 52 IPR001005 -
Aev06g2831 236 SMART sant 55 103 IPR001005 -
Aev06g2831 236 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Aev06g2831 236 PANTHER MYB TRANSCRIPTION FACTOR 5 233 - -
Aev06g2831 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Aev06g2831 236 SUPERFAMILY Homeodomain-like 5 97 IPR009057 -
Aev06g2831 236 ProSiteProfiles Myb-like domain profile. 6 50 IPR001005 -
Aev06g2831 236 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 233 - -
Aev06g2831 236 CDD SANT 61 101 IPR001005 -
Aev06g2831 236 Gene3D - 4 55 - -
Aev06g2831 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Aev06g2831 236 CDD SANT 5 50 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2831 Aev-Chr6 29992654 29997769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2831 5 169 MYB Transcription Factor Family AT1G66370 51.977 9.26e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g2831 Myb_DNA-binding 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2831 K09422 - gmx:100809746 360.533