Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2808 ATGACCCTTTCCAAGTGCTTCACCACCACCGCCACCACCACCTTTGCGAATTTTCCTGACCATGCCAGTTTGAGAAAGCCCTTGAAGGAACTCTGCCAAGAACGGCGCGTTTCAGGTGGTATCATTCTTGCACCTGAAGGAATCAATGGCAGCATATGCGGCACTCGGGAGTCAGTGGAGAAAGTTCTTGCATTTATACAAAGTGATGACCGATTAAAGGGGCTAAGACGAATTGAATCGCCTGTCAGTCCTGAGGAGGAAGCTATTCACCATGGACACAGTGCCAGTTCTCCTCTTGCTGCAGGGGAAGATGCACCTTTTCGATGGGATCATGTGAGGGTCAAGTTGAAGAAAGAGATTGTCACTCTTGGGATGCCTGCCGTATTACCTATTGAAAAGGTTGGGAAGTATGTCGGCCCAAAAGATTGGGATGCTTTGATTAGCGATCCAGATACAGTGAAGCTTGAAAGTCGGAGGCGCATGGCTCTATTCTCCACCTCTAGGGCATTGGTTTCCTCTTCCTCAATATGTATAAGTAAAAGGGACGGTTTGGCCCTCATTGGTGGTGGTTCCTCTGTCCCATTGGGCCCCTACAGCCACATCAGCAAGTTTAGGATCAGGGTGGTGATTGATGTGCGGAATAACTATGAAACAAGAATAGGAAAGTTTAAAGGAGCAGTTGACCCTTGTACTACATCATTTCGTGAATTCCCAACTTGGGTGGAGGAACATTTCCAACTTACCAGAGGTGAGCTTCTTCCAGAAATTGAGATAAACAACTCAGTCCAAAGTGTTGAAAAGGAAATGGAGAATTCAAAAGAACATATGTCAAAACGTGTTGCGATGTATTGCACCGGAGGTATTCGTTGCGAGAAAGCAACAAGTCTCCTTCTCAGCAAAGGTTTCAAAGAGATTTATCATCTGGAAGGTGGAATTCTGAAATATCTTGAGGAGGTTCCCGAGACGCAGAGCCTCTGGGAGGGAGAGTGTTTCGTCTTCGACAAACGAGTCTCGGTCGATCACGGTTTGGTGCAAGGAAACTTCAAGCTCTGCTATGGTTGCAAGCAGCCTGTGAGTGATGCTGACATGGAAGCTCCAGAATATGAATTTGGAGTTTCTTGTCCTCACTGTTTTTCGCAGAAATCAGAAGAAGAGAAGGATAGGGCTCGGGCGCGGCAACGACAATTTGAGAGATGGGGAATCATAGGTAGTCCAGATAAGGGTCGCCGGCCGGAAACTAAACTGGATGATGGCAGCAGGAAACCGAACCAGCTTTCTCGTTCTGTTTAA 1290 0.4705 MTLSKCFTTTATTTFANFPDHASLRKPLKELCQERRVSGGIILAPEGINGSICGTRESVEKVLAFIQSDDRLKGLRRIESPVSPEEEAIHHGHSASSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPAVLPIEKVGKYVGPKDWDALISDPDTVKLESRRRMALFSTSRALVSSSSICISKRDGLALIGGGSSVPLGPYSHISKFRIRVVIDVRNNYETRIGKFKGAVDPCTTSFREFPTWVEEHFQLTRGELLPEIEINNSVQSVEKEMENSKEHMSKRVAMYCTGGIRCEKATSLLLSKGFKEIYHLEGGILKYLEEVPETQSLWEGECFVFDKRVSVDHGLVQGNFKLCYGCKQPVSDADMEAPEYEFGVSCPHCFSQKSEEEKDRARARQRQFERWGIIGSPDKGRRPETKLDDGSRKPNQLSRSV* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2808 429 ProSiteProfiles Rhodanese domain profile. 208 324 IPR001763 -
Aev06g2808 429 Pfam UPF0176 acylphosphatase like domain 13 120 IPR040503 -
Aev06g2808 429 Pfam Rhodanese-like domain 205 317 IPR001763 -
Aev06g2808 429 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 208 350 IPR036873 -
Aev06g2808 429 MobiDBLite consensus disorder prediction 381 429 - -
Aev06g2808 429 Gene3D - 122 359 IPR036873 -
Aev06g2808 429 MobiDBLite consensus disorder prediction 403 421 - -
Aev06g2808 429 SMART rhod_4 193 321 IPR001763 -
Aev06g2808 429 MobiDBLite consensus disorder prediction 381 395 - -
Aev06g2808 429 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 15 410 - -
Aev06g2808 429 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 15 410 IPR020936 -
Aev06g2808 429 Gene3D - 4 121 - -
Aev06g2808 429 CDD RHOD_YceA 208 317 - -
Aev06g2808 429 Hamap tRNA uridine(34) hydroxylase [trhO]. 5 361 IPR020936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2808 Aev-Chr6 29603302 29621997 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2808 15 423 Sulfurtransferasese or Rhodanese AT2G40760 61.314 1.05e-179 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2808 - - gmx:100784854 597.43