Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2803 ATGAAGGATAGGCAACGGTGGAGAGCTGAAGAGGATGCTTTGTTGCGTGCTTATGTGAAACAGTACGGTCCTAGGGAATGGAATCTCGTGTCTCAGCGGATGAACCAACCTCTAAATAGGGATGCCAAATCATGCTTAGAAAGGTGGAAGAACTACCTCAAGCCTGGTATTAAGAAAGGATCTCTGACCGAGGAAGAGCAACGCCTTGTCATCAACCTTCAAGCAAAACATGGGAACAAGTGGAAGAAAATCGCTGCGGAAGTCCCCGGCCGTACTGCTAAGAGGTTAGGGAAGTGGTGGGAAGTATTCAAAGAGAAGCAGCAAAGAGAAGCGAAAGTGATTAGTAGGACCATCGACCCAATAAACGATAGCAAGTACGAGCATATATTAGAGAGCTTTGCAGAGAAACTAGTGAAAGAGCGACCTTCACCGTCATTTGCCATGGTTGCTGCCAACAGTTCTTTTCTTCATACTGATGCGCCGCCAGCCCCTGCACCAGCTCTGCTTCCTTCTTGGCTCTCAAATTCCAATAGCACCGCAACTGTCAGGCCACCTTCCCCTTCTGTGACGCTAAGTCTTTCTCCCTCCACAGTCGCAGCGCCCACTCCTTGGTTGCAACCAGTAAGAGGACCGGAGAATGCTTCTCTAGTCTTGGGTCATGTGGGACCTCACAGGTCTGTTCTTGCTTTTGGTGATAACATGGTCATGTCTGAGTTGGTGGAGTGCTGCAAGGAGCTTGAAGAAGTGCACCATGCTTTGGCGGCACATAAGAAGGAGGCAGCTTGGCGGTTAAGTAGGGTTGAATTGCAGCTGGAATCGGAGAAGATGTGTCGAAGGAGGGAAAAGATGGAAGAAATTGAAGCAAAGATTAAAGCTCTCAGGGAAGAGCAGGCTGCCGCGTTGGATAGAATCGAAGCAGAGTACAAGGAGCAGTTGGCAGGGTTGAGACAAGATGCGGAAACCAAGGAGCAGAAGTTGGCGGAGCAATGGGCCGCAAAGCACTTGCGCCTTACCAAATTTCTAGAGCAAGTAGGATGCAGGTCCAGGTTTGCTGAGACAAATGGAAGATAG 1071 0.4939 MKDRQRWRAEEDALLRAYVKQYGPREWNLVSQRMNQPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVINLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREAKVISRTIDPINDSKYEHILESFAEKLVKERPSPSFAMVAANSSFLHTDAPPAPAPALLPSWLSNSNSTATVRPPSPSVTLSLSPSTVAAPTPWLQPVRGPENASLVLGHVGPHRSVLAFGDNMVMSELVECCKELEEVHHALAAHKKEAAWRLSRVELQLESEKMCRRREKMEEIEAKIKALREEQAAALDRIEAEYKEQLAGLRQDAETKEQKLAEQWAAKHLRLTKFLEQVGCRSRFAETNGR* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2803 356 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 356 - -
Aev06g2803 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Aev06g2803 356 Gene3D - 62 124 - -
Aev06g2803 356 Pfam Myb-like DNA-binding domain 7 67 - -
Aev06g2803 356 CDD SANT 6 53 IPR001005 -
Aev06g2803 356 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Aev06g2803 356 Gene3D - 4 58 - -
Aev06g2803 356 PANTHER TRANSCRIPTION FACTOR AS1 1 356 IPR031055 GO:0005634|GO:0006351|GO:0010338
Aev06g2803 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Aev06g2803 356 Coils Coil 283 329 - -
Aev06g2803 356 CDD SANT 63 104 IPR001005 -
Aev06g2803 356 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Aev06g2803 356 SMART sant 58 106 IPR001005 -
Aev06g2803 356 SMART sant 3 55 IPR001005 -
Aev06g2803 356 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2803 Aev-Chr6 29573377 29574447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2803 1 347 MYB Transcription Factor Family AT2G37630 65.940 5.13e-160 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g2803 Myb_DNA-bind_6 3.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2803 K09422 - gmx:100819082 564.303