Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2787 ATGGTTGAGTCAGCCATGTCAAATGCAATGACGATGATGGAGGAAGTAGTAATGGCATCTTGGTCAGAAGGGTCAGAGAATAATGATGAAGAGCTTGTTAGAGAGCTTTTAGATGATGTGTCTCCCCTTCTTATGCTTCCTTCACCCGAGGAGGCAACAAATGCAACTGAATTACCAAACAATAACAACACAATAATAAGAGCTTCTTCTTCTTTTTCAAGTGATGATGGCCAAGCCATTAATAGGTTCATCTCAAACATTTACTCGGGGCCTACAATTACGGATATTGAAAATGCTTTATCAGTGACCAACCCAAAGGAGCATTTCCAACACCTCTCATCAGCAAGGATTTCAATATTGGAAAGGGGTTTGAGTAAAATTGAGAATAAGTATACTCTCAAAATCAAGTGTTTTGGCAATGGGATGGGTGATGATGGATATAAGTGGAGGAAGTATGGACAAAAATCTATCAAGAATAGCCCAAATCCTAGGAGCTACTATAGGTGCACTAACCCAAGGTGCAGTGCGAAGAAGCAGGTTGAGAGATCCAATGAGGACCCAGACACTCTTATCATCACCTATGAAGGGCTACATTTGCATTTTGCTTACCCATATTTTCTCACTGGACAACCAAACCAATCTTCTTCAGATCCTCCAATCAAGAAGCCCAAGCCTACCTCTTCACAAGCCCAAGATATCAATGAAGTCCAACAGACACAAGAAGCCCACAAAGCCCAACCCAATGCTACTTTGGGCCTGATAGCATCCACTTTGATGGACTCTGTAGAGGACAAGACCCAAGAAAATTTGGCCTCACAAGGGTTGCTTGAAGACATGGTGCCCTTCATGGTTAGGAACCCCAAGAACAATGTCAACAATTCTCATCACTCAAAATTCTCTTGTTCTAAGTACAATTCTTCACCAACTTCATCACCTCCTTCTATGTGGTCTTCAAATTATTCCTCCTCATGTTATACCATAGGTTTAAATTATAGCACTTAA 1002 0.4122 MVESAMSNAMTMMEEVVMASWSEGSENNDEELVRELLDDVSPLLMLPSPEEATNATELPNNNNTIIRASSSFSSDDGQAINRFISNIYSGPTITDIENALSVTNPKEHFQHLSSARISILERGLSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPYFLTGQPNQSSSDPPIKKPKPTSSQAQDINEVQQTQEAHKAQPNATLGLIASTLMDSVEDKTQENLASQGLLEDMVPFMVRNPKNNVNNSHHSKFSCSKYNSSPTSSPPSMWSSNYSSSCYTIGLNYST* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2787 333 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 24 307 - -
Aev06g2787 333 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 307 IPR044810 GO:0003700
Aev06g2787 333 SMART WRKY_cls 143 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g2787 333 Gene3D WRKY domain 139 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev06g2787 333 Pfam WRKY DNA -binding domain 144 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g2787 333 MobiDBLite consensus disorder prediction 211 246 - -
Aev06g2787 333 ProSiteProfiles WRKY domain profile. 138 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g2787 333 SUPERFAMILY WRKY DNA-binding domain 141 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2787 Aev-Chr6 29413665 29417284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2787 81 286 WRKY Transcription Factor Family AT5G43290 48.889 7.20e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev06g2787 WRKY 6.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2787 - - gmx:100810459 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2787 06 29413665 29417284 Aev06g2787 06 29413665 29417284 ECH