Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2777 ATGATGTTGAATCGTGGTGGTGGAGGAGATGAATTGTATGAGCAACTTTGGGAAGCATGTGCAGGACCTCATGTGGATGTTCCTCGTGCTGGCCAAAGGGTCTTCTATTTTCCTCAGGGACACATGGAGCAATTAGAAGCATCAACAAATCAGGAACTAAATCAGAGGATTCCAGTGTTCAAACTTCCCACCAAGATCCTATGTCGGGTCGTCAACGTCCATTTACTGGCTGAACAAGAAACGGATGAGGTTTATGCACAGATCACTTTGGTGCCAGAATCTAATCAAGCTGAGCCTGCAAGCCCTGATCCATGCCCTGCTGAACTTCCAAGGCCAACAATTCACTCCTTCTGCAAGGTCTTAACTGCCTCTGATACAAGCACTCATGGTGGGTTCTCCGTCCTCAGGAAGCATGCCACCGAATGCCTTCCGGCTTTGGACATGTCTCAACCAACCCCAACTCAGGAATTGGTTGCCAAGGATCTTCATGGTTATGAATGGCGCTTTAAGCATATATTTAGAGGTCAGCCACGCAGGCACTTGCTCACAACTGGATGGAGTACTTTTGTGACATCCAAGAGACTAGTTGCTGGAGACACCTTTGTATTTCTGAGGGGGCACAATGGAGAACTACGTGTCGGAGTGAGGCGTATTGCTCCTCAGCAGAGCAACATGCCTTCATCTGTGATTTCAAGCCAGAGCATGCACCTAGGAGTGCTTGCAACTGCATCTCATGCTGTAGCAACTCAGACTCTTTTTGTAGTATATTACAAGCCAAGGAGGAGCCAGTTTATAGTAAGTGTGAACAAGTATTTGGATTCTGTTAACCACAAATTTGGTGTTGGTATGAGGTTCAAGATGAGGTTTGAGGGTGAAGATTCCCCTGAGACTGAGAAAAGATTTTCCGGCACAATAATTGGAGAAGAGGATATTTCTCCTCATTGGGTAAATTCGAAATGGCGATCACTCAAGGTTCAATGGGATGAACCGGCATCTGTTCCAAGACCTGATAGGGTCTCACCATGGGAAGTTGAACCTCTTGTGGCTTCTGTTCCTACGTCTTCAGTTCAACCACCTGTTGTAAAGAATAAAAGGCCTCGGCCGCCTAGTGAAGTTCATGAACTTGACACGACATCAGCTGCTTCTGCTTTCTGGGATGCTGGGCTGACACAGTCGGATATAACACAATTTAGTGTTATTGCTGAAAGCAAGATGAGTGATAGCACCCATATGTGGCATCATAAGCAGATTGATAACAGTAAAAATAGCTGCAATGCTATATCAAGGAATCAGATAGAAGGAAATTGGCTATCTTCTCCCAATTCCAGTGGCCCTTCTCATTTCTTTCAGGACAAAACTGACGATAGCCCGAGTGCCACAGCTTGGCCTATTCTGAAACCTCACTCGGAAAGAGCGAACAACAACCATTTGCTTGAGCAAGTTGATAAGGAGAATAAAGTAGAGACAGCAGCTACAAGTTGCCGACTGTTCGGAATTGAGCTCATTAATCATGCCAGGAACTCTGCTGTTATAGAGAAGGCATGTGTACATGCAGCAAATGTATCTGGAGGCGCCAATGAGGGCTGTGTTAGCACCTTGACCAGAACTGATGCAGACCATAGTTCTGATGTGGAAACAAGAGTGCAAGTGTCAACAAAAGAAACTCAAAGCAAACAAATCTGCAGCAGAAGTTGCACTAAGGTTCATATGCAGGGAGTTGCGGTGGGGCGTGCCGTGGACTTGACCATGTTGGATGGGTATGATCAACTTGTAGTTGAATTGGAGAAGATGTTTGACATAAAGGGGCAGCTTCAGCTCAGGAATAAATGGGAAATTGTCTTCACTGATGATGAAGGGGACATGATGCTTGTTGGTGATGATCCATGGCCTGAATTCTGCAATATGGTGAGAAGGATCTTCATCTGCTCCAGCCAGGACGTGAAGAAAATGAGCCCAGGAAGCAAATTGCCTATCTCTTCAACAGAAGAGACTGTAATTAGCTCAGAAACAGCTGAGACCTGA 2022 0.457 MMLNRGGGGDELYEQLWEACAGPHVDVPRAGQRVFYFPQGHMEQLEASTNQELNQRIPVFKLPTKILCRVVNVHLLAEQETDEVYAQITLVPESNQAEPASPDPCPAELPRPTIHSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGHNGELRVGVRRIAPQQSNMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRRSQFIVSVNKYLDSVNHKFGVGMRFKMRFEGEDSPETEKRFSGTIIGEEDISPHWVNSKWRSLKVQWDEPASVPRPDRVSPWEVEPLVASVPTSSVQPPVVKNKRPRPPSEVHELDTTSAASAFWDAGLTQSDITQFSVIAESKMSDSTHMWHHKQIDNSKNSCNAISRNQIEGNWLSSPNSSGPSHFFQDKTDDSPSATAWPILKPHSERANNNHLLEQVDKENKVETAATSCRLFGIELINHARNSAVIEKACVHAANVSGGANEGCVSTLTRTDADHSSDVETRVQVSTKETQSKQICSRSCTKVHMQGVAVGRAVDLTMLDGYDQLVVELEKMFDIKGQLQLRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMSPGSKLPISSTEETVISSETAET* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2777 673 Gene3D - 559 651 - -
Aev06g2777 673 Pfam Auxin response factor 243 324 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev06g2777 673 SUPERFAMILY CAD & PB1 domains 566 639 - -
Aev06g2777 673 MobiDBLite consensus disorder prediction 354 373 - -
Aev06g2777 673 MobiDBLite consensus disorder prediction 434 462 - -
Aev06g2777 673 Gene3D - 278 351 - -
Aev06g2777 673 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 5 663 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev06g2777 673 CDD B3_DNA 115 217 IPR003340 GO:0003677
Aev06g2777 673 Gene3D - 114 218 IPR015300 -
Aev06g2777 673 SMART B3_2 117 219 IPR003340 GO:0003677
Aev06g2777 673 SUPERFAMILY DNA-binding pseudobarrel domain 108 246 IPR015300 -
Aev06g2777 673 ProSiteProfiles B3 DNA-binding domain profile. 117 219 IPR003340 GO:0003677
Aev06g2777 673 Pfam B3 DNA binding domain 117 217 IPR003340 GO:0003677
Aev06g2777 673 ProSiteProfiles PB1 domain profile. 563 644 IPR000270 GO:0005515
Aev06g2777 673 PANTHER AUXIN RESPONSE FACTOR 5 663 - -
Aev06g2777 673 MobiDBLite consensus disorder prediction 648 673 - -
Aev06g2777 673 MobiDBLite consensus disorder prediction 434 457 - -
Aev06g2777 673 Pfam AUX/IAA family 534 599 IPR033389 -
Aev06g2777 673 Pfam AUX/IAA family 609 652 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2777 Aev-Chr6 29284322 29288810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2777 2 656 B3 DNA Binding Superfamily AT4G23980 58.182 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev06g2777 AUX_IAA 3.5e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2777 K14486 - gmx:100779003 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2777 06 29284322 29288810 Aev02g1699 02 18680046 18684325 PCT