Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2766 ATGAAGTTTAATACCCCAAATTCCACTAAAACTAAGCAGATAAGATGGCTTTGGAATGATCAAGGTGGTCAAAAGAAACAATTTAGATCTTATACTTGTAACTTTTGCAAGAGAGGATTCTCAAATGCACAAGCACTAGGAGGCCACATGAATATTCATAGAAGAGACAGAGCTAAGCTCAAACAATCTTATGAAGAGAATTTGCTTTCCTTGGACATCATCAAGAACACAAGATTGGATTCATATTGGGAAGAAGATGATGTTAACAATAATAATCACAAAATGTCATTCACTACTTTTCCTGAAAAAGATAATAATAATAATGTTCATAATCATCTTGCACATAAATGGGGAAAAGTAATTAGTACTACAAAGCTTGTTCATCTCCCTTCATTTATTGAAGAGGAGAAAGATGATTTAGATCTTGAGCTTAGATTAGGTCGTGATCCTCAAAAGGCACCAATACTGATGAGCATGAGAGAATTCTTTTGA 492 0.3374 MKFNTPNSTKTKQIRWLWNDQGGQKKQFRSYTCNFCKRGFSNAQALGGHMNIHRRDRAKLKQSYEENLLSLDIIKNTRLDSYWEEDDVNNNNHKMSFTTFPEKDNNNNVHNHLAHKWGKVISTTKLVHLPSFIEEEKDDLDLELRLGRDPQKAPILMSMREFF* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2766 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 58 IPR013087 -
Aev06g2766 163 ProSitePatterns Zinc finger C2H2 type domain signature. 33 53 IPR013087 -
Aev06g2766 163 PANTHER OS07G0101800 PROTEIN 1 152 - -
Aev06g2766 163 SMART c2h2final6 31 53 IPR013087 -
Aev06g2766 163 Gene3D Classic Zinc Finger 7 99 - -
Aev06g2766 163 PANTHER TRANSCRIPTIONAL REGULATOR TAC1 1 152 - -
Aev06g2766 163 SUPERFAMILY beta-beta-alpha zinc fingers 29 57 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2766 Aev-Chr6 29208625 29209116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2766 27 152 C2H2 Transcription Factor Family AT3G53820 40.000 2.33e-19 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev06g2766 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2766 - - ccaj:109793777 134.806