Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2708 ATGGCTGAGGTGAAATTAGAAGAGTGTTGTGTGGAGAATAAGCAATCCACAGCTGCTTCCTGCTCCTCTGTATCTGAAGGCAGTGGGAGTGCAATTCATAAGTCTCCTGCGATATGTAGCCCGGCATCAACATCACCTTCGCATCGGAGGACCACTGGCCCTATAAGGCGCGCAAAGGGAGGTTGGACAGTACAAGAGGATGAGACATTAAGGAATGCTGTTGCAACTTTCAAGGGAAAGAGTTGGAAGAAAATAGCTGAGTTTTTCCCAGATAGATCGGAAGTTCAATGTCTGCACAGATGGCAAAAAGTTCTCAATCCAGAACTTGTTAAAGGACCTTGGACACAGGAGGAGGATGACAAAATTGTTGAACTGGTGTCAACATATGGACCTACAAAATGGTCTCTGATAGCTAAGTCTCTGCCTGGTCGAATAGGGAAACAGTGTCGAGAGCGGTGGCACAATCATCTTAATCCTGACATAAAGAAAGATGCCTGGACTTTGGAGGAGGAATTGGCTTTGATGCAGGCTCATCATATGAATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTTCCTGGAAGGACTGATAATGCGATAAAGAACCACTGGAATAGTTCTTTAAAGAAAAAGTTGGATTTTTACTTAGCTACGGGAAGACTTCCGCCAGCACCAAAGAGCAGTTCGCAAAGTGCTGTCAAAGATACAATTAGACATTCTGTTACTAAAACAATACTTGTTTGTGCAAATAAAGAATTAAATGTAGCTGTTGAGACATCGTCTGAAACTACAGCCATTAGTAAGCTAGATGAGAGTGGCAAGAATCAGTTATCCCCGGGAAGAGTTAGAGAAGCCGGTGATTCTTCAAGTGTTCCTGCAAATGAATCTGCTGATTCTGACTGTGTAGAATGCAAGTCTGGATTACCCAACATTGATATCAGCCTTAGCAACTCAGAACCAGTGTCAAGAGCAAATTTTGGTATAACTTGTGGGACAAGTTTTGAGAATTCTGGACACCATGGAAACTCAACAATGGAGCATCATATAAGCAATGTTGAAATGAGCAGTAGCAGCAGGTTAATCAGAACATCTTTTTCCCAAGAAAGTCCAACCTGTGGTTCTCTGTGTTATGCGCCACCACAGTTAAATGGTCCAGTTTCTTTAGATTCTCTTTATTTAAATTTTGGCCTGAAGAATGAGTACTGCACTAATCCAATGGCATCGCCTGTTTTCTTCACTCCACCTTGTGTGAAGGGTAGAGAATTATGCATAGAGTCACCCGAATCAATTTTGAAAAGGGCTGCTAATACCTTTCCAAACACTCCTTCCATAATGAGGAAGAGACGGAATGGAGTCCAAACACACACTGCTTCTAGTAAAATTTTAAAGGAAGATAATTCATCAACTTCTAATGAACTAGGGAGAAGCACAGATAATTCTGGTTCTGATGTTGGGAGGTTCTATGAGACTCCAGCAAGCCGTGACAATGAGAGTGACATTCCCAGGGCATTCAATGCATCTCCACCATACCGGTTAAGATCCAAGAGAACAGCAGTTCTCAAGTCTGTGGAAAAACAACTTGAGTTTGCATTTGACAAAGAGAAGAATGATGGTGATGTCAACTCAAAGGAAAAATCTGCAAAGCTGAGCAATATGATGAATGAAGATTGTCTGCATGAAACAAAATTGGTGGTGACATAG 1701 0.4203 MAEVKLEECCVENKQSTAASCSSVSEGSGSAIHKSPAICSPASTSPSHRRTTGPIRRAKGGWTVQEDETLRNAVATFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSTYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLEEELALMQAHHMNGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLATGRLPPAPKSSSQSAVKDTIRHSVTKTILVCANKELNVAVETSSETTAISKLDESGKNQLSPGRVREAGDSSSVPANESADSDCVECKSGLPNIDISLSNSEPVSRANFGITCGTSFENSGHHGNSTMEHHISNVEMSSSSRLIRTSFSQESPTCGSLCYAPPQLNGPVSLDSLYLNFGLKNEYCTNPMASPVFFTPPCVKGRELCIESPESILKRAANTFPNTPSIMRKRRNGVQTHTASSKILKEDNSSTSNELGRSTDNSGSDVGRFYETPASRDNESDIPRAFNASPPYRLRSKRTAVLKSVEKQLEFAFDKEKNDGDVNSKEKSAKLSNMMNEDCLHETKLVVT* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2708 566 MobiDBLite consensus disorder prediction 21 55 - -
Aev06g2708 566 MobiDBLite consensus disorder prediction 441 486 - -
Aev06g2708 566 MobiDBLite consensus disorder prediction 37 51 - -
Aev06g2708 566 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Aev06g2708 566 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Aev06g2708 566 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Aev06g2708 566 SMART sant 110 159 IPR001005 -
Aev06g2708 566 SMART sant 58 107 IPR001005 -
Aev06g2708 566 SMART sant 162 210 IPR001005 -
Aev06g2708 566 CDD SANT 113 157 IPR001005 -
Aev06g2708 566 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Aev06g2708 566 MobiDBLite consensus disorder prediction 441 507 - -
Aev06g2708 566 SUPERFAMILY Homeodomain-like 60 115 IPR009057 -
Aev06g2708 566 PANTHER MYB-RELATED PROTEIN B-LIKE 19 477 - -
Aev06g2708 566 CDD SANT 165 208 IPR001005 -
Aev06g2708 566 Pfam Myb-like DNA-binding domain 114 172 - -
Aev06g2708 566 MobiDBLite consensus disorder prediction 259 274 - -
Aev06g2708 566 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Aev06g2708 566 Gene3D - 111 162 - -
Aev06g2708 566 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Aev06g2708 566 Gene3D - 58 110 - -
Aev06g2708 566 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Aev06g2708 566 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Aev06g2708 566 MobiDBLite consensus disorder prediction 259 299 - -
Aev06g2708 566 CDD SANT 62 105 IPR001005 -
Aev06g2708 566 PANTHER MYB PROTEIN-RELATED 19 477 - -
Aev06g2708 566 Gene3D - 164 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2708 Aev-Chr6 28445585 28451613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2708 2 545 MYB Transcription Factor Family AT3G09370 49.464 9.41e-159 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g2708 Myb_DNA-bind_6 6.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2708 K09422 - gmx:778081 836.639