Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2688 ATGGCCACCATGGAACGCCGAAAGACGCTCACCATGAATTGGGCTGGCCTCGGCGAGGACGACGACGAGCATTTCTTTGAGACTTACAATCGCCTATCCACTGTCGACCCCCGTGACTTAGGTTCCTCCTCCGATGAAGACGAGGAATTTGTAGATCCTCGCACATCCTTCGCCTCTACCATCTCCTCTATGCACTCCTCGCGTTTTGGAGCGTTTTCAAGAAAAGGGACTATCGCCATGGCGGCTTCTTCTTCAAACTTCAATTACGATATTTGGATGGCTGCACCAGGATCAATAACAGAGAGAAGGAAAAGATTGCTTGGAAGCATGGGTTTGGATGAAAACAAAGAGTCGTTAAAGGTCATAGATATTGATATTGTTCGCGTCATCACAAAGAAGTTTGAGAAAAATGTTGAGTCTCCTCTTCCTTCTCCTCCTCTTCCTCTTCCTCTTCCTCTTCCTTCTTCTTCTTCTACGATATCGAGGGTCATCGATACTACTACTACAGATGTTGGGGTTGATACTACTACATCCTCCTCTGTTTCCCCTGCTTTGGAAGAGCCAAAAACAGAGTGCTGCCCTGTTTCCTCTGTTTTGTTCGGTTTGGTTCGGTCACGTTCTGAAGGGGACATCGAATCGTTTTCCATGGCGAAGGCGAGGAAAGATGAGTTGATAGGGAAGATATCAAAGCAGAGGCTAACTAGAACTACCTCAGAGATATCTGTACAACATGCTAAGATGGTCCCTTCAGCATTGGTCGTGAAGGAACCTGTTATTATGGCAGGGGAACCAAATCATAATAGGAAGGTATCATCAGCAATGGTGGCGACAGGTGGAGGAGTAGGGGCATTCTTCTTGATCAAGAATTTGGACACCGGGAAGGAATTCATCGTCAATGAATACGGCGAAGATGGGATGTGGAATAGGTTGAGTGATTTGGAAACAGGGAAGCAACTAACCATGGAAGAATTCGAGAAAATCGTGGGACATTCTGCTGTTGTGAAGGAGTATATGAGGCGCGCCAAGGCAGCGAGGAGTGAAGGAATGGGGAAGAGTATCTTCTCCAATTCATATATTTCGAGGAGCTTGAGACTCAGTAAGAAGAGAGGAGCTTCATTGTTGAAGAACATAAAAGGCGTAGCGAGTGGTCGGGTTGCCGGTGAGAAGGAAAAAGAAACACCAGTGATGGATCAGAAACCACAAGGGAAGAATGAATGGGTGAAGGTTCGGCAAAGTGGCAAGTCTCAAAAGGAGCTATCAGCAATGCATATGTGTCAAGAGTTTCAGGCTCATAAGGGATGTATTTGGACACTAAAATTCAGTTTTGATGGAAGATACTTGGCGAGTGGAGGAGAAGACACAGTGGTTCATGTGTGGGAAGTGCAGGAATGTGAGGTTATGTCTATGAAGCCAGAAGAAGGGAATCTTACTCCTATTCATCCCTCGTTGTTGGAGCGAGAGGCTACTCCTTTATCCGGGGAGAAGAAGAAGAAGGGTAAATCTGGAGGAGGTAAAAAAGGGGTCACAATTCCGGAATATGTTCATGTCCCTGAAACTGTGTTCACTTTTTTTGATAAACCATATTGTTCGTTTCATGGTCATTCCAATGAAATATTGGATTTGTCATGGTCCAAATCTCAGCTACTTCTCTCATCTTCGATGGATAAAACAGTGAGATTATGGGACTTGGAAACTAAGACATGCTTGAAGTTTTTTGCACATAATGACTATGTAACATGCGTACAATTCAATCCTGTAACTGATGATTATTTCATTAGTGGCTCCCTTGATGCTAAGGTTAGAATATGGAACATACCTGCACGCCATGTTGCGGATTGGACTGATGTCCATGAAATGGTTACTTCAGTCTCTTACACTCCAGATGGTCAGGCTGCTCTGGTTGGTACACAAAAAGGGGGTTGCCGTACTTACAAAATAGAAGATAACGCATTAAGTCAAACAGGAACAATTGAACTTCGACGAAAGAAGAAATCTCAACTCAGAAAGATTACTGGTGTCCAATACTCCCCAAGCAATCCATCAAAAGCGCTTGTTACTTCAGGTGACTCCAGGATAAAAATTGTTGATAATTTAGGAGTTGTTCACAAGTTTACAGGTTTTCGAAATACAGACAGCCACATTGCAGCTTCATTTAGTCCAAATGGAAGATACATCATTTGTGCAAGTGAAGATTCTAATGTATATGTATGGAAACATGAAGAGCCTCATAATACAAACACTGGTAAAGGCAGAACCGTGAATTTAACCCAATCTTATGAATGTTTCAACTGTAAAGATGTCTCAGTAGCATTACCTTGGCCTTGTACCATCAAAGGAAATCCACCAATAGAGCCATCACAACATTCCAAAAAGAACACAAAACGTTCCACTCCTGGTGCTGATGACCAATCCTCCGACACAAACAACAAGAAATCAATGTTACCACCTCTTCCAAAGAAAAATAACAACAACAACAACAACAACAATAATAATCAAGGAACAGAGAGTGCCTCTGCCTCACCAGAACGTGATCCTGCATCAATTTCAAACACACAACCTGGAATTGGGGACTCATTTGCAAATAGTAAGAGAATGCTTCCACCTATCCCAAACAAGAAAACCAATAATAATAACCAAGCCACGGAAAATGATTGTAGTTCCCCTGAAGATGAACTTGAAGCAATTTCACATGATGATTCAAGTTTAGGTGATTCATTTGCTTCAGGTTCTGCATCAATTAGGTGCGACGATTCGCCTTCTATATCTTTTAACTATGCATCATCATCATGTGAAACTAGCAATGGTACCTCAACAACTAACCATAATTCAGCATGGGGTATGGTAATTGTGACTGCTGGGTATGGAGGTGAAATAAGGTGTTACCAAAATTTTGGGTTGCCTAGGAGGATGAATCGTCAAACAAATCTTTTTGGAGGCCCTACATAA 2946 0.4267 MATMERRKTLTMNWAGLGEDDDEHFFETYNRLSTVDPRDLGSSSDEDEEFVDPRTSFASTISSMHSSRFGAFSRKGTIAMAASSSNFNYDIWMAAPGSITERRKRLLGSMGLDENKESLKVIDIDIVRVITKKFEKNVESPLPSPPLPLPLPLPSSSSTISRVIDTTTTDVGVDTTTSSSVSPALEEPKTECCPVSSVLFGLVRSRSEGDIESFSMAKARKDELIGKISKQRLTRTTSEISVQHAKMVPSALVVKEPVIMAGEPNHNRKVSSAMVATGGGVGAFFLIKNLDTGKEFIVNEYGEDGMWNRLSDLETGKQLTMEEFEKIVGHSAVVKEYMRRAKAARSEGMGKSIFSNSYISRSLRLSKKRGASLLKNIKGVASGRVAGEKEKETPVMDQKPQGKNEWVKVRQSGKSQKELSAMHMCQEFQAHKGCIWTLKFSFDGRYLASGGEDTVVHVWEVQECEVMSMKPEEGNLTPIHPSLLEREATPLSGEKKKKGKSGGGKKGVTIPEYVHVPETVFTFFDKPYCSFHGHSNEILDLSWSKSQLLLSSSMDKTVRLWDLETKTCLKFFAHNDYVTCVQFNPVTDDYFISGSLDAKVRIWNIPARHVADWTDVHEMVTSVSYTPDGQAALVGTQKGGCRTYKIEDNALSQTGTIELRRKKKSQLRKITGVQYSPSNPSKALVTSGDSRIKIVDNLGVVHKFTGFRNTDSHIAASFSPNGRYIICASEDSNVYVWKHEEPHNTNTGKGRTVNLTQSYECFNCKDVSVALPWPCTIKGNPPIEPSQHSKKNTKRSTPGADDQSSDTNNKKSMLPPLPKKNNNNNNNNNNNQGTESASASPERDPASISNTQPGIGDSFANSKRMLPPIPNKKTNNNNQATENDCSSPEDELEAISHDDSSLGDSFASGSASIRCDDSPSISFNYASSSCETSNGTSTTNHNSAWGMVIVTAGYGGEIRCYQNFGLPRRMNRQTNLFGGPT* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2688 981 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 428 462 - -
Aev06g2688 981 SUPERFAMILY WD40 repeat-like 422 749 IPR036322 GO:0005515
Aev06g2688 981 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 531 565 - -
Aev06g2688 981 Pfam WD domain, G-beta repeat 529 562 IPR001680 GO:0005515
Aev06g2688 981 Pfam WD domain, G-beta repeat 702 738 IPR001680 GO:0005515
Aev06g2688 981 Pfam WD domain, G-beta repeat 427 459 IPR001680 GO:0005515
Aev06g2688 981 Pfam WD domain, G-beta repeat 568 604 IPR001680 GO:0005515
Aev06g2688 981 ProSiteProfiles Trp-Asp (WD) repeats profile. 717 747 IPR001680 GO:0005515
Aev06g2688 981 MobiDBLite consensus disorder prediction 779 901 - -
Aev06g2688 981 ProSiteProfiles Trp-Asp (WD) repeats profile. 428 469 IPR001680 GO:0005515
Aev06g2688 981 PRINTS G protein beta WD-40 repeat signature 549 563 IPR020472 -
Aev06g2688 981 PRINTS G protein beta WD-40 repeat signature 591 605 IPR020472 -
Aev06g2688 981 PRINTS G protein beta WD-40 repeat signature 447 461 IPR020472 -
Aev06g2688 981 ProSiteProfiles Trp-Asp (WD) repeats profile. 531 571 IPR001680 GO:0005515
Aev06g2688 981 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 571 605 - -
Aev06g2688 981 ProSitePatterns Trp-Asp (WD) repeats signature. 447 461 IPR019775 -
Aev06g2688 981 SMART WD40_4 697 738 IPR001680 GO:0005515
Aev06g2688 981 SMART WD40_4 524 562 IPR001680 GO:0005515
Aev06g2688 981 SMART WD40_4 421 460 IPR001680 GO:0005515
Aev06g2688 981 SMART WD40_4 565 604 IPR001680 GO:0005515
Aev06g2688 981 SMART WD40_4 660 696 IPR001680 GO:0005515
Aev06g2688 981 SMART WD40_4 606 645 IPR001680 GO:0005515
Aev06g2688 981 MobiDBLite consensus disorder prediction 868 885 - -
Aev06g2688 981 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 12 972 - -
Aev06g2688 981 MobiDBLite consensus disorder prediction 798 858 - -
Aev06g2688 981 ProSiteProfiles Trp-Asp (WD) repeats profile. 571 605 IPR001680 GO:0005515
Aev06g2688 981 MobiDBLite consensus disorder prediction 484 505 - -
Aev06g2688 981 Gene3D - 412 767 IPR015943 GO:0005515
Aev06g2688 981 ProSitePatterns Trp-Asp (WD) repeats signature. 549 563 IPR019775 -
Aev06g2688 981 PANTHER WD REPEAT DOMAIN 44 12 972 IPR040324 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2688 Aev-Chr6 28197259 28202286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2688 530 818 Miscellaneous Gene Families AT5G08390 22.403 6.57e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2688 K20241 - gmx:100782200 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2688 06 28197259 28202286 Aev02g1661 02 18274783 18289797 PCT