Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2686 ATGGCGGAAATCGAAGTCTCTTCGCTGCTCCACCATCTCAACCGCGCCGCCACCAAAACCTCCGAGATCTCGGGCTTCAAGCGCGTCGTCAAGAAGCAATGCAGTGACCTCAGCCGCAGGATCAGGTTCCTCGCACCTCTCTTCCCGGAATTGCTCGATGTAAGGGACGCCATTTCAAGCGACACCGTTTCGGGACTCCTCTCGCTCAAGGAAGCCCTAGCGAAGGCGAAGGAATTGCTCGAGTTCTCTTGCCGAGGAAGCCAGGTTTACATGATACTGGAGCAAGAGAAAATTAAATACAATTTTATTGATCTTGCTGTTCATTTTGAACAAGCTATAGGAAAGACATCCTTTGACAACCTTGATATATCTGAAGAGGTCAAGGAGCAGGTTGCACTAGTGACTGCTCAATTTAAAAGAGCCAAGGAGCTTTTTGATCCACCTGGCATTCAGCTTTATGATAGTCTGGTGTCCATTTCCAACCAGAGCTTTGTTGTAAATACTGAACCAGCCAAACTAAGTGTAATATGTGAAAAGCTAAACTTTCTGACCGTGGAAGATATCAAACAAGAATTGCTTGCACTTCATAAGATGGTTGTAGACACGGCTGGTCAATTTGAGCAAAGCACACGGGAGGTGTCTTTAGTTCTAAAAAAACTTGAAGATTTCATGCTGACAGATTCTGCAAATGTTCGTGTGTCATCAAGTGAGGAGTCCCCTGCCCATGCTGACACAAAACTATGTTCTCAATCACAGGTTATACCAGATGAGTTTCGCTGCCCAATATCTCTTGAGCTAATGAAAGATCCTGTTATCATTTCTACAGGGCAGACATATGAGCGAGCATGCATAAAGAAATGGCTGGAAGCAGGGCATGGAACATGTCCTAAGACTCAGCAGATTCTTTCAAGTTCTGTCCTTATACCTAACCATGTTTTATATAGCCTGATATGGAATTGGTGTGAGGCAAATGGAGTGGAACTGCCTAAAAGGTTAGGAAACTTACGGCTCTACAAGGCAGCTTCAGATGGCTCTTCTGAATTTATAGATATCGATGCCCTGATGAGCAGTCTTACTTCAACTGACATTGAAGATCAGCGATGTGCAGCAGGCGAGCTCCGTCTTCTTGCCAAGCACAGCAGTCAAAATCGTAAGTTGATTGCTGAGGCTGGTGCCATACCCCTCCTTGTTGATCTCCTCTATGTACCTGATGCGGGCACCCAAGAGCATGCAGTTACTGCTCTTCTGAACCTATCTATCTGTTGGGATAATAAAGAGCGCATCATGGCTTCTGAAGCTCTTCCGGGAATCCTTCATGTGCTAAATAATGGCAGTATGGCAGCTCGGGAAAATGCAGCAGCCATCTTTTTCAGCCTTTCTTCACCAAACGAGTACAAAGTGGCAATAGGTGCATCTGGAGCAATCCAAGCACTCGTTATGCTTTTTTGCGAGGGAAGCCAAAGAGCGAAGGTGGATGCTGCAACAGCACTATTCAATCTGTGTCTATTCCCAAGGAACAAAGGACGAGCAATAAGAGCTGGCATTATGCCTAAGTTGATGGAAATGCTAACAGAACCTGATGGGGAGATGAGGGATGGGGCACTGGCAATCATGGCTGTACTAGTTAGCCACCCTAAGGGTAAAGCTGCAATTGGATCCATGAATGTTGTGCCCACTCTGGTGGATTTAGTCGCTAATGGATCGCCTGAGAACAAAGAGAATGCAACTTCAGTGCTGGTGGACCTCTGTGGTGGAGATCCACTCCACTTGTCCAGTATGTGTTCACTTGGGGTGGTCAATCCTCTCAAGGAACTTGCAGAAAATGGTTCAGAAAGGAGTAAGCGGAAAGCTAACCAGCTTCTTGAGCTGATAGGCGGGAAATCGTTGTAG 1890 0.4619 MAEIEVSSLLHHLNRAATKTSEISGFKRVVKKQCSDLSRRIRFLAPLFPELLDVRDAISSDTVSGLLSLKEALAKAKELLEFSCRGSQVYMILEQEKIKYNFIDLAVHFEQAIGKTSFDNLDISEEVKEQVALVTAQFKRAKELFDPPGIQLYDSLVSISNQSFVVNTEPAKLSVICEKLNFLTVEDIKQELLALHKMVVDTAGQFEQSTREVSLVLKKLEDFMLTDSANVRVSSSEESPAHADTKLCSQSQVIPDEFRCPISLELMKDPVIISTGQTYERACIKKWLEAGHGTCPKTQQILSSSVLIPNHVLYSLIWNWCEANGVELPKRLGNLRLYKAASDGSSEFIDIDALMSSLTSTDIEDQRCAAGELRLLAKHSSQNRKLIAEAGAIPLLVDLLYVPDAGTQEHAVTALLNLSICWDNKERIMASEALPGILHVLNNGSMAARENAAAIFFSLSSPNEYKVAIGASGAIQALVMLFCEGSQRAKVDAATALFNLCLFPRNKGRAIRAGIMPKLMEMLTEPDGEMRDGALAIMAVLVSHPKGKAAIGSMNVVPTLVDLVANGSPENKENATSVLVDLCGGDPLHLSSMCSLGVVNPLKELAENGSERSKRKANQLLELIGGKSL* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2686 629 Gene3D - 337 624 IPR011989 -
Aev06g2686 629 SMART arm_5 503 543 IPR000225 GO:0005515
Aev06g2686 629 SMART arm_5 462 502 IPR000225 GO:0005515
Aev06g2686 629 SMART arm_5 544 584 IPR000225 GO:0005515
Aev06g2686 629 SMART arm_5 380 420 IPR000225 GO:0005515
Aev06g2686 629 Gene3D - 22 119 IPR036537 GO:0007166
Aev06g2686 629 ProSiteProfiles U-box domain profile. 253 327 IPR003613 GO:0004842|GO:0016567
Aev06g2686 629 CDD RING-Ubox_PUB 258 300 IPR045210 -
Aev06g2686 629 Pfam U-box domain 254 324 IPR003613 GO:0004842|GO:0016567
Aev06g2686 629 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 8 624 - -
Aev06g2686 629 SUPERFAMILY RING/U-box 253 330 - -
Aev06g2686 629 Pfam Armadillo/beta-catenin-like repeat 380 419 IPR000225 GO:0005515
Aev06g2686 629 Pfam Armadillo/beta-catenin-like repeat 545 583 IPR000225 GO:0005515
Aev06g2686 629 Pfam Armadillo/beta-catenin-like repeat 463 501 IPR000225 GO:0005515
Aev06g2686 629 PANTHER U BOX DOMAIN-CONTAINING 8 624 - -
Aev06g2686 629 SMART Ubox_2 257 320 IPR003613 GO:0004842|GO:0016567
Aev06g2686 629 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 391 433 IPR000225 GO:0005515
Aev06g2686 629 SUPERFAMILY ARM repeat 351 622 IPR016024 -
Aev06g2686 629 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 327 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2686 Aev-Chr6 28167785 28176066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2686 3 624 U-box Gene Family AT3G46510 50.160 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2686 - - var:108326899 775.778