LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g2686	ATGGCGGAAATCGAAGTCTCTTCGCTGCTCCACCATCTCAACCGCGCCGCCACCAAAACCTCCGAGATCTCGGGCTTCAAGCGCGTCGTCAAGAAGCAATGCAGTGACCTCAGCCGCAGGATCAGGTTCCTCGCACCTCTCTTCCCGGAATTGCTCGATGTAAGGGACGCCATTTCAAGCGACACCGTTTCGGGACTCCTCTCGCTCAAGGAAGCCCTAGCGAAGGCGAAGGAATTGCTCGAGTTCTCTTGCCGAGGAAGCCAGGTTTACATGATACTGGAGCAAGAGAAAATTAAATACAATTTTATTGATCTTGCTGTTCATTTTGAACAAGCTATAGGAAAGACATCCTTTGACAACCTTGATATATCTGAAGAGGTCAAGGAGCAGGTTGCACTAGTGACTGCTCAATTTAAAAGAGCCAAGGAGCTTTTTGATCCACCTGGCATTCAGCTTTATGATAGTCTGGTGTCCATTTCCAACCAGAGCTTTGTTGTAAATACTGAACCAGCCAAACTAAGTGTAATATGTGAAAAGCTAAACTTTCTGACCGTGGAAGATATCAAACAAGAATTGCTTGCACTTCATAAGATGGTTGTAGACACGGCTGGTCAATTTGAGCAAAGCACACGGGAGGTGTCTTTAGTTCTAAAAAAACTTGAAGATTTCATGCTGACAGATTCTGCAAATGTTCGTGTGTCATCAAGTGAGGAGTCCCCTGCCCATGCTGACACAAAACTATGTTCTCAATCACAGGTTATACCAGATGAGTTTCGCTGCCCAATATCTCTTGAGCTAATGAAAGATCCTGTTATCATTTCTACAGGGCAGACATATGAGCGAGCATGCATAAAGAAATGGCTGGAAGCAGGGCATGGAACATGTCCTAAGACTCAGCAGATTCTTTCAAGTTCTGTCCTTATACCTAACCATGTTTTATATAGCCTGATATGGAATTGGTGTGAGGCAAATGGAGTGGAACTGCCTAAAAGGTTAGGAAACTTACGGCTCTACAAGGCAGCTTCAGATGGCTCTTCTGAATTTATAGATATCGATGCCCTGATGAGCAGTCTTACTTCAACTGACATTGAAGATCAGCGATGTGCAGCAGGCGAGCTCCGTCTTCTTGCCAAGCACAGCAGTCAAAATCGTAAGTTGATTGCTGAGGCTGGTGCCATACCCCTCCTTGTTGATCTCCTCTATGTACCTGATGCGGGCACCCAAGAGCATGCAGTTACTGCTCTTCTGAACCTATCTATCTGTTGGGATAATAAAGAGCGCATCATGGCTTCTGAAGCTCTTCCGGGAATCCTTCATGTGCTAAATAATGGCAGTATGGCAGCTCGGGAAAATGCAGCAGCCATCTTTTTCAGCCTTTCTTCACCAAACGAGTACAAAGTGGCAATAGGTGCATCTGGAGCAATCCAAGCACTCGTTATGCTTTTTTGCGAGGGAAGCCAAAGAGCGAAGGTGGATGCTGCAACAGCACTATTCAATCTGTGTCTATTCCCAAGGAACAAAGGACGAGCAATAAGAGCTGGCATTATGCCTAAGTTGATGGAAATGCTAACAGAACCTGATGGGGAGATGAGGGATGGGGCACTGGCAATCATGGCTGTACTAGTTAGCCACCCTAAGGGTAAAGCTGCAATTGGATCCATGAATGTTGTGCCCACTCTGGTGGATTTAGTCGCTAATGGATCGCCTGAGAACAAAGAGAATGCAACTTCAGTGCTGGTGGACCTCTGTGGTGGAGATCCACTCCACTTGTCCAGTATGTGTTCACTTGGGGTGGTCAATCCTCTCAAGGAACTTGCAGAAAATGGTTCAGAAAGGAGTAAGCGGAAAGCTAACCAGCTTCTTGAGCTGATAGGCGGGAAATCGTTGTAG	1890	0.4619	MAEIEVSSLLHHLNRAATKTSEISGFKRVVKKQCSDLSRRIRFLAPLFPELLDVRDAISSDTVSGLLSLKEALAKAKELLEFSCRGSQVYMILEQEKIKYNFIDLAVHFEQAIGKTSFDNLDISEEVKEQVALVTAQFKRAKELFDPPGIQLYDSLVSISNQSFVVNTEPAKLSVICEKLNFLTVEDIKQELLALHKMVVDTAGQFEQSTREVSLVLKKLEDFMLTDSANVRVSSSEESPAHADTKLCSQSQVIPDEFRCPISLELMKDPVIISTGQTYERACIKKWLEAGHGTCPKTQQILSSSVLIPNHVLYSLIWNWCEANGVELPKRLGNLRLYKAASDGSSEFIDIDALMSSLTSTDIEDQRCAAGELRLLAKHSSQNRKLIAEAGAIPLLVDLLYVPDAGTQEHAVTALLNLSICWDNKERIMASEALPGILHVLNNGSMAARENAAAIFFSLSSPNEYKVAIGASGAIQALVMLFCEGSQRAKVDAATALFNLCLFPRNKGRAIRAGIMPKLMEMLTEPDGEMRDGALAIMAVLVSHPKGKAAIGSMNVVPTLVDLVANGSPENKENATSVLVDLCGGDPLHLSSMCSLGVVNPLKELAENGSERSKRKANQLLELIGGKSL*	630

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev06g2686	629	Gene3D	-	337	624	IPR011989	-
	Aev06g2686	629	SMART	arm_5	503	543	IPR000225	GO:0005515
	Aev06g2686	629	SMART	arm_5	462	502	IPR000225	GO:0005515
	Aev06g2686	629	SMART	arm_5	544	584	IPR000225	GO:0005515
	Aev06g2686	629	SMART	arm_5	380	420	IPR000225	GO:0005515
	Aev06g2686	629	Gene3D	-	22	119	IPR036537	GO:0007166
	Aev06g2686	629	ProSiteProfiles	U-box domain profile.	253	327	IPR003613	GO:0004842\|GO:0016567
	Aev06g2686	629	CDD	RING-Ubox_PUB	258	300	IPR045210	-
	Aev06g2686	629	Pfam	U-box domain	254	324	IPR003613	GO:0004842\|GO:0016567
	Aev06g2686	629	PANTHER	RING-TYPE E3 UBIQUITIN TRANSFERASE	8	624	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g2686	Aev-Chr6	28167785	28176066	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g2686	3	624	U-box Gene Family	AT3G46510	50.160	0.0	615

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g2686	-		-	var:108326899	775.778

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