Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2659 ATGGAGGTGCAGCCTCTGCGATTCTTCACTCTCTGTTTTCTGCTCATGTCGGTGTTGATTTCAACTGGCGCCAAAGCAATCAACCACACTGAGGAACAGATCATGGAATTGAGAGATGTAGGAGAATCGAAGTTGCAGAGCTTGAAGAGTTCGTCAATGGCGGAAAGGTCAGGGGATACATTGAATGAGCATGCAGTTGATAATCCAGAGGAGATAGCTTCTATGGTTGATATGGCCATACGCAATCACACGGAGAGAAGGAAGCTGAACTTCTTCTCATGCGGAACCGGGAACCCAATCGACGACTGCTGGCGCTGCGATCGGCGTTGGTACCTCCGCCGCAAGCGCCTCGCCAACTGCGCCATCGGCTTCGGCCGCAACGCAATTGGCGGGCGAGACGGCAGGTACTACGTTGTCACGGACCCGTCGGACGATGACGCCGTGAACCCCAAGCCTGGCACCCTCCGACACGCGGTGATCCAGGACAGGCCCCTCTGGATCGTGTTCAAGCGTGACATGGTGATCACCCTCAAGCAGGAGCTGATCATGAACAGCTTCAAGACCATCGATGGGCGCGGCGCCAACGTCCACATTGCCCATGGCGCGTGCATCACGGTCCAGTTCATCACGAACGTCATCATCCACGGCATCCACATCCATGACTGCATCCAAACCGGCAACGCCATGGTTCGTAGCTCCCCCTCGCATTACGGGTGGAGGACCCTGGCTGATGGGGACGGGATTTCAATCTTTGGCTCCAGTCACATTTGGATTGACCACAACTCGCTTTCCAATTGCTCTGACGGCCTTATTGATGCTATTATTGGTTCAACTGCTATCACCATTTCGAATAACTACTTTACACACCACAATGAGGTTATGCTGCTGGGTCACAGTGACGCTTATGTTCGAGACAAGCAGATGCAAGTAACCATAGCGTACAACCATTTTGGGGAGGGCCTTATCCAAAGAATGCCGAGGTGCAGACATGGATATTTCCACGTGGTAAACAATGATTATACCCACTGGGAAATGTATGCAATTGGTGGCAGTGCTGATCCCACTATTAACAGCCAAGGCAACAGATACCTTGCCCCTCAGAACCCTTTTGCTAAGGAGGTGACAAAGAGAGTGGAGACTGGGGAACCCATATGGAAAACTTGGAACTGGAGATCCGAGGGAGACCTTCTGCTGAATGGTGCCTTTTTCACTTCATCGGGAGCAAGAGCTGCAGCAAGCTATGCTAGAGCCTCAAGTTTATCGGCCAAATCATCTTCTTTGGTTGGTACCCTTACCTCTGGTGCTGGTGTTCTTAACTGCCGCAGGGGTGTCATGTGTTAA 1341 0.5205 MEVQPLRFFTLCFLLMSVLISTGAKAINHTEEQIMELRDVGESKLQSLKSSSMAERSGDTLNEHAVDNPEEIASMVDMAIRNHTERRKLNFFSCGTGNPIDDCWRCDRRWYLRRKRLANCAIGFGRNAIGGRDGRYYVVTDPSDDDAVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIAHGACITVQFITNVIIHGIHIHDCIQTGNAMVRSSPSHYGWRTLADGDGISIFGSSHIWIDHNSLSNCSDGLIDAIIGSTAITISNNYFTHHNEVMLLGHSDAYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYLAPQNPFAKEVTKRVETGEPIWKTWNWRSEGDLLLNGAFFTSSGARAAASYARASSLSAKSSSLVGTLTSGAGVLNCRRGVMC* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2659 446 PANTHER PECTATE LYASE 18-RELATED 14 443 IPR045032 GO:0030570
Aev06g2659 446 Gene3D - 97 439 IPR012334 -
Aev06g2659 446 PANTHER PECTATE LYASE 14 443 - -
Aev06g2659 446 Pfam Pectate lyase 180 361 IPR002022 -
Aev06g2659 446 SUPERFAMILY Pectin lyase-like 75 441 IPR011050 -
Aev06g2659 446 SMART amb_all 172 369 IPR002022 -
Aev06g2659 446 PRINTS Pollen allergen Amb family signature 144 169 IPR018082 -
Aev06g2659 446 PRINTS Pollen allergen Amb family signature 244 265 IPR018082 -
Aev06g2659 446 PRINTS Pollen allergen Amb family signature 120 137 IPR018082 -
Aev06g2659 446 PRINTS Pollen allergen Amb family signature 346 365 IPR018082 -
Aev06g2659 446 PRINTS Pollen allergen Amb family signature 417 440 IPR018082 -
Aev06g2659 446 PRINTS Pollen allergen Amb family signature 180 196 IPR018082 -
Aev06g2659 446 PRINTS Pollen allergen Amb family signature 388 412 IPR018082 -
Aev06g2659 446 PRINTS Pollen allergen Amb family signature 324 343 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2659 Aev-Chr6 27865367 27873379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2659 38 446 Polysaccharide Lyase AT4G13710 76.019 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2659 K01728 - gmx:100790659 764.992