Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2602 ATGTCTCTTCCAAGACCCAAAGAGGGTGATAAGCCAAAAAACAACAATAACAAAAACGCTCTTGAGCAGCTGATGAAGGAAGGAGTAGCAGCAGCACCCTCTTCTTCCTCCTCTCCTTCTTGGAATAGGATCAACAATGACCCCACAAACTCTTTTCCTCCTATACCTCCACACAAGAGAAGCAAACCCGAAGATAGCGATGACGATCTGTTCACTGTTCCCGACGTGGAAGCCACACCAAGCATCCATTCTGCAGTGATGAACCAAAATAGTAACACTACCAATCAAAGCAACGCAACAGACCCTCAGCTTCAAACTGCCGGTGGTTTCCCCGGAAAACGCCGCCGTGGAAGAAACCCCGTAGACAAGGAGTATAGACGCCTCAAGAGATTATTGAGGAACAGGGTTTCAGCTCAACAAGCCCGTGAAAGAAAGAAGGTATATGTGAATGACTTGGAATCAAGAGCTAAAGAGTTGGAGGACAAGAATTCCAAGTTAGAAGAGCGTATCTCCACCTTAATAAACGAGAACACCATGCTTCGGAAGGTTCTTCTGAATACGAGGCCTAAGGTTGATGAGAGCGTTGAAGCATAG 594 0.463 MSLPRPKEGDKPKNNNNKNALEQLMKEGVAAAPSSSSSPSWNRINNDPTNSFPPIPPHKRSKPEDSDDDLFTVPDVEATPSIHSAVMNQNSNTTNQSNATDPQLQTAGGFPGKRRRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELEDKNSKLEERISTLINENTMLRKVLLNTRPKVDESVEA* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2602 197 SUPERFAMILY Leucine zipper domain 125 184 IPR046347 GO:0003700|GO:0006355
Aev06g2602 197 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 129 144 IPR004827 GO:0003700|GO:0006355
Aev06g2602 197 Pfam bZIP transcription factor 123 182 IPR004827 GO:0003700|GO:0006355
Aev06g2602 197 MobiDBLite consensus disorder prediction 1 15 - -
Aev06g2602 197 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 29 196 IPR044280 GO:0000981|GO:0045944
Aev06g2602 197 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 29 196 - -
Aev06g2602 197 MobiDBLite consensus disorder prediction 82 105 - -
Aev06g2602 197 SMART brlzneu 122 186 IPR004827 GO:0003700|GO:0006355
Aev06g2602 197 CDD bZIP_HY5-like 136 177 - -
Aev06g2602 197 Coils Coil 142 183 - -
Aev06g2602 197 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 124 187 IPR004827 GO:0003700|GO:0006355
Aev06g2602 197 MobiDBLite consensus disorder prediction 1 122 - -
Aev06g2602 197 PRINTS cAMP response element binding (CREB) protein signature 25 47 - -
Aev06g2602 197 PRINTS cAMP response element binding (CREB) protein signature 121 137 - -
Aev06g2602 197 PRINTS cAMP response element binding (CREB) protein signature 139 159 - -
Aev06g2602 197 PRINTS cAMP response element binding (CREB) protein signature 159 176 - -
Aev06g2602 197 Gene3D Single helix bin 145 186 - -
Aev06g2602 197 MobiDBLite consensus disorder prediction 30 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2602 Aev-Chr6 27079434 27087314 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2602 101 193 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 75.789 4.90e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aev06g2602 bZIP_1 1.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2602 K16241 - gmx:778143 234.187