LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g2601	ATGGATTTATGGGATTCATGGGCTTGTTTCTTTCTTTTTTGTGGCTTCTGGGTTGTCACTTTCAGTGAACAAGACGGTTTCTTGAGTATATCTTGTGGTGGAATAGCCAGTTTTAGGGATTCATCCAACATTTCATGGGTCCCAGACACTACCTACATTACCTCAGGCAAGACAACCACCATCAATTACAGTGATAATGTCTCGGCTCGGTTCTTCCCGAATTCTACAGGCCGCGGTTGCTATAGGATACCGGTGAGCAACGCGACGAGTTTGATTCTTGTGAGAGCAAGATTTGTGTACAAGAACTATGATGGACTTGGGAAACCACCTAGATTCTCTGTTTCTCTTGGGACAGCTATTGGTGCCGAAATAAATCTCAATAAAGATGATCCATGGATAGAAGAGTTTCTCTGGACTGTGAATAAGGACACTCTGCCTCTCTGTTTGAATGCGATTCCAAGTGGTGGTTCTCCTGTTATTTCTTCAATTGAAATCAGACCTCTTCCTAAAGGATCCTACACAAATGGCAAACAAGATTTTCCGAATAAATTACTTAGGAAGAGCTATCGTGTTGATTGCGGCTACACCAATGAGTCTATTCAGTACCCCGTGGATCCATATGACAGAATATGGAATGCTGATAGAAGTTATATTACACCGTTTCATGCTACAACTGGATTTAAGATTCAAAGTAGCTTCAGCCAATCAAATCTTTTGGAGAAACCACCTGCAGTTGTTCTTCAAACTGCTAGAGTCTTGGCGCGGCAAAATGTGCTGGCATATAACCTCCCTCTTGATGCATTAGGGGACTACTACATCATACTCTATTTTGCTGGAGTTCTTCCCGTGTTCCCCTCTTTTGATGTATTGATAAATGGAGATCTAGTAAAATCAAACTATACAATAAAGAGCTCAGATATCAGTGCTTTGTATGTCATACAAAAGGGAATAAGCAGCTTAAACATAACACTAAGGGGAGTTAGCTTCTACCCTCAGATCAATGCATTTGAGGTATATAGTATGATTGATATTCCATCTGAAGCCTCCTCAACCACAGTTTCAGCTATGCAGGTTATTCAGCAATCCACTGGCTTGGATTTAGGATGGCAAGATGATCCATGTTCCCCTTTCCCATGGGATCATGTTGATTGTGAAGGAAGCCTTGTTACTTCATTGGATCTCTCTGACATAAATTTGAGATCAATTACTCCTACATTTGGTGACTTATTGGACCTTAAAACACTGGATTTACACAACACATCACTTGCTGGTGAAATACAGAATTTGGGTAGCTTGCAACATCTTGAAAAACTGAATCTTAGTTTCAATCAGTTAACATCCTTTGGTGAAGAGCTGGAGAATTTGATTAGCCTTCAATCATTAGACTTGCAACACAATAGTCTACAGGGAACAGTTCCTGATAACTTGGGAGAGTTGGAGGACCTCCACTTATTGAATCTGGAAAACAACAAACTACAAGGTCCACTTCCTCAGTCCTTGAACAAAGAAACCTTAGAGATCAGAACATCAGGCAATTTGTGCCTCACTTTTTCCACATCCACATGTGATGATGCATCCTCCAATAATCCTTCAATTGAGACCCCACAAGTGACTATAATTCCCCAAAAGAAGCACAATGTACATAACCATCTAGCAGTCATACTAGGCACAGTTGGAGGAGCTACACTTGCCCTTATGATATGTCTTTCAGTATTCATATATGTTGCAAAAAAGAGATACCAAGTCTCACAGATTTCAAGAACACAAACGGATATGAGGAGCTGGGGTGCAGAGAAAGTCTTTTCCTACAAGGAAATCAAAGAAGCCACAAGCAATTTTAAAGAAGTGATAGGACGTGGAAGTTTTGGATCTGTTTACCTTGGAAAACTTCCGGATGGAAAATCAGTAGCTGTTAAAGTTCGGTTTGACAAATCACAACTTGGGGTTGATTCTTTCATCAATGAGATTCATCTATTGTCGAAAATCCGCCATCAAAATCTTGTGTGTTTGGAAGGATTTTGTCATGAATCAAAGCACCAGATATTGGTTTATGAGTATTTGCCTGGTGGATCCCTGGCTGATCACCTCTATGGTACAAACAGCAAAAGAACTCCCTTGAGCTGGGTCCGGCGGTTGAAAATTGCAGTCGATGCAGCAAAAGGATTGGATTATTTGCATAATGGAAGTGAACCACGAATCATACACCGTGATGTCAAGTGCAGCAACATCCTCTTGGATATGGAGATGAATGCCAAGGTCTGTGACTTTGGCCTCTCCAAGCAAGTAACAAAGGCAGATGCAACTCACGTGACCACTGTTGTAAAAGGAACTGCTGGTTATCTAGATCCAGAGTACTATTCCACCCAACAACTCACAGAAAAAAGTGATGTGTATAGTTTTGGAGTTGTGCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGACTCACTCTGGAACTCCTGATTCATTCAATTTGGTGTTATGGGCCAAACCTTACTTGCAAGCCGGTGCATTTGAAATTGTGGATGAAAGCTTACAAGGAACTTTTGATCTAGAGAGCATGAGAAAGGCAACCCTCATTGCCATAAAGTCAGTGGAAAGAGATGCATCACAGAGGCCACCTATTTCAGAGGTATTAGCAGAGCTTAAGGAAGCTTACAATGTTCAGCTCAGATTCCTTGAATCTTGTCAAAATGAGAATTGA	2703	0.4103	MDLWDSWACFFLFCGFWVVTFSEQDGFLSISCGGIASFRDSSNISWVPDTTYITSGKTTTINYSDNVSARFFPNSTGRGCYRIPVSNATSLILVRARFVYKNYDGLGKPPRFSVSLGTAIGAEINLNKDDPWIEEFLWTVNKDTLPLCLNAIPSGGSPVISSIEIRPLPKGSYTNGKQDFPNKLLRKSYRVDCGYTNESIQYPVDPYDRIWNADRSYITPFHATTGFKIQSSFSQSNLLEKPPAVVLQTARVLARQNVLAYNLPLDALGDYYIILYFAGVLPVFPSFDVLINGDLVKSNYTIKSSDISALYVIQKGISSLNITLRGVSFYPQINAFEVYSMIDIPSEASSTTVSAMQVIQQSTGLDLGWQDDPCSPFPWDHVDCEGSLVTSLDLSDINLRSITPTFGDLLDLKTLDLHNTSLAGEIQNLGSLQHLEKLNLSFNQLTSFGEELENLISLQSLDLQHNSLQGTVPDNLGELEDLHLLNLENNKLQGPLPQSLNKETLEIRTSGNLCLTFSTSTCDDASSNNPSIETPQVTIIPQKKHNVHNHLAVILGTVGGATLALMICLSVFIYVAKKRYQVSQISRTQTDMRSWGAEKVFSYKEIKEATSNFKEVIGRGSFGSVYLGKLPDGKSVAVKVRFDKSQLGVDSFINEIHLLSKIRHQNLVCLEGFCHESKHQILVYEYLPGGSLADHLYGTNSKRTPLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMEMNAKVCDFGLSKQVTKADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLTHSGTPDSFNLVLWAKPYLQAGAFEIVDESLQGTFDLESMRKATLIAIKSVERDASQRPPISEVLAELKEAYNVQLRFLESCQNEN*	901

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev06g2601	900	Gene3D	-	187	342	-	-
	Aev06g2601	900	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	10	895	-	-
	Aev06g2601	900	CDD	STKc_IRAK	617	884	-	-
	Aev06g2601	900	PANTHER	OS07G0107800 PROTEIN-RELATED	10	895	-	-
	Aev06g2601	900	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	733	745	IPR008271	GO:0004672\|GO:0006468
	Aev06g2601	900	ProSiteProfiles	Leucine-rich repeat profile.	434	456	IPR001611	GO:0005515
	Aev06g2601	900	ProSitePatterns	Protein kinases ATP-binding region signature.	617	639	IPR017441	GO:0005524
	Aev06g2601	900	Gene3D	Ribonuclease Inhibitor	351	524	IPR032675	-
	Aev06g2601	900	Pfam	Malectin-like domain	30	341	IPR024788	-
	Aev06g2601	900	SMART	serkin_6	611	886	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev06g2601	900	Gene3D	Phosphorylase Kinase; domain 1	574	686	-	-
	Aev06g2601	900	Gene3D	Transferase(Phosphotransferase) domain 1	687	897	-	-
	Aev06g2601	900	SUPERFAMILY	Protein kinase-like (PK-like)	588	882	IPR011009	-
	Aev06g2601	900	SUPERFAMILY	L domain-like	355	502	-	-
	Aev06g2601	900	Pfam	Protein kinase domain	613	879	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev06g2601	900	SMART	LRR_typ_2	432	454	IPR003591	-
	Aev06g2601	900	SMART	LRR_typ_2	455	479	IPR003591	-
	Aev06g2601	900	ProSiteProfiles	Protein kinase domain profile.	611	893	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g2601	Aev-Chr6	27043162	27062909	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g2601	1	895	Receptor kinase-like Gene Family	AT5G48740	62.930	0.0	1103

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Aev06g2601		Malectin_like	9e-51	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g2601	-		-	aprc:113850446	1474.91