Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2580 ATGAGCCAGTGTGTTCCAAGCTGGGAGTTGGACGACAACAATCCACCACCGCCCACCAGAGTCTCCCTTCGTTCCAACTCCAACTCAACTGCCCCTGATGTCCCCATGTTAGATTATGAAGTTGCAGAACTGACATGGGAAAACGGACAACTATCAATGCACGGCTTAGGGTTCCCGCGTGTGCCGACCAAATCCTCCGTTGTGACAGCCACCACTACTAATAATTCCAAGTACAGCTGGGAGAAGCCTCGTGCTAGTGGCACTCTGGAGTCCATAGTAAACCAGGCCACTAGCTCACCCCACCCAGGCAAATCACCATTCCATGGTGCCGGTGGTGGCGGCGGCGGAGAAGGCAATGGTGATTGTGGTGGGGTCTATAGCAATGTTTTAGTCCCATGGTTTGATCCCCACCGGGCTGCGGCCGCCGCCACTACCTCAAACACTTTGACGATGGACGCGTTGGTACCATGCTCAAACCGCACCGAGGAGCAAAGCACGCAAGTTATGGAGACCATGCTTGGAGAGTGCATGGTGGGTTGCTCCAAGCGTGTGAGGCCGCAAGAGGAAGGAGGGTTTGTAGGCACAGCAGCAAAACGCGCGAGGGTGGCGCGTGTGCCATCGGTGGGAGGTGCTGCGCAGGAGCTGAGTAGCAGGGATCAGAGTGTGAGCGGAAGCGGTACCTTTGGGAGGGACAGCCAGCACGTGACGGTAGACACGTGTGAGAGAGAGTTGGGAGTGGGTTTCACTTCCATCTCCATGGGATCTCCGGAAAACACAAGCTCTGCAAAGCAGTGCACCAAGACCAACACCATAGATGACCATGATTCTGTTTGCCACAGTAGATCTATGAGGGAGGAAGGAGATGAGGATGAGAAAAAGAAAGAAATTGCAAAGTCTTCTGTGTCCACTAAAAGGAGTAGAGCTGCTGCTATACACAACCAATCTGAAAGGAAAAGGAGGGATAAAATAAACCAGAGAATGAAGACATTGCAAAAGCTGGTCCCAAATTCCAGCAAGACAGATAAAGCTTCAATGTTGGGTGAGGTGATAGAATATCTTAAACAGTTGCAAGCACAAGTGCAGATGATGAATAGGATCAACATGTCATCCATGATGCTGCCAATGACCATGCAACAACAGCTTCAAATGTCGATGATGGCTCCAATGGGCATGGGGATGGGCATGGGCATGGGCATGGGGATGGGAATGGATATGAACACCATGAGCCGTGCTAACATTCCTGCCATACCTCCCGTCCTCCATCCTTCTGCCTTCATGTCCATGGCTTCATGGGATGCCGCCGCCACCGCCGACCGACTACAAGGACCTCCGCCCACGGTGATATCTGACCCTTTGTCCACATTTTTTGGATGCCCATCACAGCCCATGACCATGGATGCATATAGTAGGCTTGCTGCCATGTATCAGCAGTTTCACCAACCTCCAGCTTCTGGTTCCAAAAACTGA 1467 0.5215 MSQCVPSWELDDNNPPPPTRVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGFPRVPTKSSVVTATTTNNSKYSWEKPRASGTLESIVNQATSSPHPGKSPFHGAGGGGGGEGNGDCGGVYSNVLVPWFDPHRAAAAATTSNTLTMDALVPCSNRTEEQSTQVMETMLGECMVGCSKRVRPQEEGGFVGTAAKRARVARVPSVGGAAQELSSRDQSVSGSGTFGRDSQHVTVDTCERELGVGFTSISMGSPENTSSAKQCTKTNTIDDHDSVCHSRSMREEGDEDEKKKEIAKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLGEVIEYLKQLQAQVQMMNRINMSSMMLPMTMQQQLQMSMMAPMGMGMGMGMGMGMGMDMNTMSRANIPAIPPVLHPSAFMSMASWDAAATADRLQGPPPTVISDPLSTFFGCPSQPMTMDAYSRLAAMYQQFHQPPASGSKN* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2580 488 MobiDBLite consensus disorder prediction 209 235 - -
Aev06g2580 488 MobiDBLite consensus disorder prediction 213 234 - -
Aev06g2580 488 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 307 356 IPR011598 GO:0046983
Aev06g2580 488 Pfam Helix-loop-helix DNA-binding domain 312 357 IPR011598 GO:0046983
Aev06g2580 488 PANTHER TRANSCRIPTION FACTOR UNE10 1 488 - -
Aev06g2580 488 MobiDBLite consensus disorder prediction 95 116 - -
Aev06g2580 488 MobiDBLite consensus disorder prediction 251 267 - -
Aev06g2580 488 Gene3D - 302 368 IPR036638 GO:0046983
Aev06g2580 488 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 305 369 IPR036638 GO:0046983
Aev06g2580 488 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 1 488 IPR031066 -
Aev06g2580 488 MobiDBLite consensus disorder prediction 249 325 - -
Aev06g2580 488 Coils Coil 313 333 - -
Aev06g2580 488 MobiDBLite consensus disorder prediction 1 32 - -
Aev06g2580 488 CDD bHLH_AtPIF_like 307 368 - -
Aev06g2580 488 MobiDBLite consensus disorder prediction 268 301 - -
Aev06g2580 488 MobiDBLite consensus disorder prediction 18 32 - -
Aev06g2580 488 MobiDBLite consensus disorder prediction 310 325 - -
Aev06g2580 488 SMART finulus 313 362 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2580 Aev-Chr6 26834652 26845512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2580 1 469 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 48.857 2.32e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g2580 HLH 8.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2580 - - ahf:112697399 628.632