Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2571 ATGGCTCATAAGCTTCAAAGTGTTTTCGCTACTATACTTAATCTAATAGCTTTTCTCTCAATATTCCTTATTAACCCTTCCTATTGCTACCCCAGGAAGCTTATTAATGCTTCATACTCTCCATCTGATTCAGATTGGTCAGCTGCAGTTGCCACTTGGTATGGACCTGCAAATGGTGACGGAAGTGAAGGTGGTGCTTGTGGATATGGAAGTACTGTTGGGCAACCTCCACTCTCATCAATGATATCAGCAGGAAGCCCTCTTTTATATGACTCGGGCAAAGGCTGTGGTTCTTGTTATGAGGTGAAGTGCACAGGCATTTCTGCATGCTCTGGTAACCCTGTGAGGGTAGTAATCACTGATGAGTGTGATGGGTGTGGCTCAGATGCTCAATATCACTTTGATTTGAGCGGCAGTGCTTTTGGTGCCATGGCAGTCTCAGGCCAGGATGAAGAACTACGCAATGCAGGAAAAATAAACATTCAGCATAGAAGAGTTGAATGCAACTACCCGGGTATGTCAATTGCTTTTCACGTGGATTCTGGATCCAACCAACAATATTTTGCTACCGTGATTGAATATGAAGATGGGGATGGTGACCTTGCCAAAGTTGAACTGAAGGAAGCACTAGACTCGGCCTCATGGGATTCTATGCAGCAATCGTGGGGAGCAGTTTGGAAACTTGACAAAGGCTCGCCTCTGAAAGCACCATTTTCTATTAGGCTAACCACTCTTGAGTCAGGGAAGGCCATTGTGGCCACCAATGTGATCCCTGCTGGGTGGATACCGGGTCAGACCTACATATCAATTGTCAATTTTTAA 822 0.4513 MAHKLQSVFATILNLIAFLSIFLINPSYCYPRKLINASYSPSDSDWSAAVATWYGPANGDGSEGGACGYGSTVGQPPLSSMISAGSPLLYDSGKGCGSCYEVKCTGISACSGNPVRVVITDECDGCGSDAQYHFDLSGSAFGAMAVSGQDEELRNAGKINIQHRRVECNYPGMSIAFHVDSGSNQQYFATVIEYEDGDGDLAKVELKEALDSASWDSMQQSWGAVWKLDKGSPLKAPFSIRLTTLESGKAIVATNVIPAGWIPGQTYISIVNF* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2571 273 SUPERFAMILY Barwin-like endoglucanases 38 172 IPR036908 -
Aev06g2571 273 SMART dpbb_1 82 163 IPR007112 -
Aev06g2571 273 Pfam Lytic transglycolase 83 162 IPR009009 -
Aev06g2571 273 SUPERFAMILY PHL pollen allergen 175 269 IPR036749 -
Aev06g2571 273 Gene3D - 33 169 IPR036908 -
Aev06g2571 273 PRINTS Major pollen allergen Lol pI signature 145 160 IPR005795 GO:0005576|GO:0019953
Aev06g2571 273 PRINTS Major pollen allergen Lol pI signature 123 138 IPR005795 GO:0005576|GO:0019953
Aev06g2571 273 PRINTS Major pollen allergen Lol pI signature 177 192 IPR005795 GO:0005576|GO:0019953
Aev06g2571 273 PRINTS Major pollen allergen Lol pI signature 84 95 IPR005795 GO:0005576|GO:0019953
Aev06g2571 273 PRINTS Major pollen allergen Lol pI signature 193 208 IPR005795 GO:0005576|GO:0019953
Aev06g2571 273 PRINTS Major pollen allergen Lol pI signature 224 241 IPR005795 GO:0005576|GO:0019953
Aev06g2571 273 PANTHER EXPANSIN-B2-RELATED 11 273 - -
Aev06g2571 273 Pfam Expansin C-terminal domain 175 258 IPR007117 -
Aev06g2571 273 PANTHER EXPANSIN-B3 11 273 - -
Aev06g2571 273 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 186 269 IPR007117 -
Aev06g2571 273 Gene3D - 170 273 IPR036749 -
Aev06g2571 273 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 64 173 IPR007112 -
Aev06g2571 273 PRINTS Expansin/Lol pI family signature 156 172 IPR007118 GO:0005576
Aev06g2571 273 PRINTS Expansin/Lol pI family signature 63 81 IPR007118 GO:0005576
Aev06g2571 273 PRINTS Expansin/Lol pI family signature 255 269 IPR007118 GO:0005576
Aev06g2571 273 PRINTS Expansin/Lol pI family signature 45 60 IPR007118 GO:0005576
Aev06g2571 273 PRINTS Expansin/Lol pI family signature 215 229 IPR007118 GO:0005576
Aev06g2571 273 PRINTS Expansin/Lol pI family signature 86 104 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2571 Aev-Chr6 26673832 26677182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2571 9 273 Expansin Gene Family AT1G65680 58.271 1.45e-111 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2571 - - gmx:548090 482.256