Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2529 ATGGTCAATGGTAAACCTAGGATAAGAAATCCCAAACTCATCAGGGATTTTTATAAACTAAAAGGAGTATGGCTATTTCATCTTTACTACTGGGGTATTTCAAGGTTTCTTCTGAGTATCTTAAACCCTGATAATGTGGAAATCGAGTATCCTATTGTTCCAATTAAGATTGAGGATGATGCCAATGCTCAGGATAAACGTACTTTTACTATTGTCCTAAGCAAGTACATGACTACTGGATCGAAACTGAATCTTCCTGCTGTTATGTCCCAATTCATTTACAAGACTTGCACTTCTAAATGGAATCTTATGGGTCCCAACAATATTCCTATCAAGTGCAAGGTCTTAACCAAAGAGAAACCAAAGGCTAAATTTGGTAGTGGTTGGAGAGATTTCTGCCGCAGTAACAATCTGCAGCCAGGGGATACATGCACTTTCAAGTTTGTACCAGGATCCAGGAGCACTATGCAAGTTCATATTAGTAAATCATAG 492 0.3821 MVNGKPRIRNPKLIRDFYKLKGVWLFHLYYWGISRFLLSILNPDNVEIEYPIVPIKIEDDANAQDKRTFTIVLSKYMTTGSKLNLPAVMSQFIYKTCTSKWNLMGPNNIPIKCKVLTKEKPKAKFGSGWRDFCRSNNLQPGDTCTFKFVPGSRSTMQVHISKS* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2529 163 Pfam B3 DNA binding domain 71 161 IPR003340 GO:0003677
Aev06g2529 163 ProSiteProfiles B3 DNA-binding domain profile. 100 163 IPR003340 GO:0003677
Aev06g2529 163 CDD B3_DNA 103 162 IPR003340 GO:0003677
Aev06g2529 163 Gene3D - 56 163 IPR015300 -
Aev06g2529 163 SUPERFAMILY DNA-binding pseudobarrel domain 65 161 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2529 Aev-Chr6 26130596 26131184 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev06g2529 B3 2.4e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2529 - - hbr:110670871 51.2174