Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2502 ATGAGTGTTGTCGGTGGGGTGACGGTAGCGGGGGCAGCTAGGGTCGTCTTTGGCGCTGCAGTGGTGGCTGGAGATGACATGGAGTGGTTGACAGTGGGTAGTGGTCCTAATAGTGGCTGTGGTGGCGGTGGTTGTGGTGGCCATCAGTCGGCGGTGGTGATCTGCTTCACCTTTCCCTTCATGGAAAACCAGTTCTTTCTCAATGCCGATGTAACTCCTCAACTGCATCTTGAGTCATCACCGCCTCAATCAATGCCCAAATGGCAATCACTATCATCATCATCATCTCCCATGGACGTTCCAGCAACGGTTTTGAATTGTTCATCTGAGCAGAACCAAGACTGCTTCTACACCCCCAATTGGGACAAGTCAACGGATCACAGCCTCCAGTTTGATTCTGCACTGAGCTCAATGGTATCTTCCCCTGCAGCTTCCAATTCCAACATGTCCAATGAGAATTTCGCCATCAGGGAACTCATAGGCAAATTGGGCAACATTGGTGGCACCTCCGATGAGATCTCACCTCATTCTCATCAGTCTCTGGTTGTTGGTGCATCTTCCTTCATCAATGGCAGCAACAGCACCAATACTTCATGTTACAGCACCCCTTTGAGCTCTCCTCCAAAGGTCAGCAACATCCCAAAAATCATGGTGAATGAGAGCTTCCCCAATTTGGGGAGATCAATGGCCTTGAATTCTAGCGTGGCTGAATTCTCAACTGATCCTGGTTTTGCAGAGAGGGCCGCAAAGTTTTCTTGCTTTGGAAGCAGGAGCTTCAATGGCAGGACTAGCCATCAATTGGGGCTGAACAATACCGAGTTGATTCAGAGATCTAATCCGTTGATGGAAAATGGCAAGCTCTCGAGGGTCTCGAGTACCCCATCGCTGAAAGTGCTTGGATCTCATAAGGGAAACAAGAATTCTCCATTGAGAGACCTAAAGGAAGTGACTAATTCTCAAGAGGAATCTACGATCTCGGAGCAAACCCCAAATGGGGACAGTGGGCCGAAACTTTCCCCTTTTGCGAATTTAAGGAAGAGAAAAGCTTCGTCCAAAGGAAAAGCCAAAGAAACTTCAACCCCCATTAACAATTCTCACACGGCTGATGAAGCCAGTGAGGATTTAAATGCAAAGCGCAAAAAACCCAATGAGGGTGAGGGAAATGAAAATGGACCTGTGAAGGCAGAGGAGGATTCCAGAGAGAGAACAAGTAATTCTGGTGATGAGAAACAAAACAAGAGTAACGCAAAACCTCCTGAACCTCCAAAAGATTACATTCATGTTAGAGCAAGAAGAGGTCAAGCCACTGATAGCCATAGTCTTGCAGAAAGAGTTCGAAGGGAGAAAATTAGTGAAAGGATGAAGCTTCTCCAAGATCTCGTTCCAGGTTGCAATAAGGTTACTGGCAAAGCACTTATGCTTGATGAAATTATAAACTATGTGCAGTCATTGCAGCGTCAGGTTGAGTTCCTGTCGATGAAATTGGCTTCCGTCAACACCAAGCTGAACTTTAGTATTGAAAGTCTAATCTCAAAAGATATATTTCAATCAAATAATTCTTTAACACACCCAATATTCCCATTAGATTCCTCTGCTATATCTTTTTATGGGCAATATCCCCAGCAAAACCCAGCAATCCACAATAACAATCCTAATGGAACTGTGACCCACAGCTCAGTGGACCCGTTAGATAGTTTGTGCCAAAATCTTGGCTTGCAGTTACCTCCCCTAAATGGGTTTAATAATGAGGATGGCTCTCAGTATCCAATAACATTTCCTGAGGATGACCTGCACGCCATTGTTCAATGGGATTTGAATAACTGCAAATAG 1830 0.4552 MSVVGGVTVAGAARVVFGAAVVAGDDMEWLTVGSGPNSGCGGGGCGGHQSAVVICFTFPFMENQFFLNADVTPQLHLESSPPQSMPKWQSLSSSSSPMDVPATVLNCSSEQNQDCFYTPNWDKSTDHSLQFDSALSSMVSSPAASNSNMSNENFAIRELIGKLGNIGGTSDEISPHSHQSLVVGASSFINGSNSTNTSCYSTPLSSPPKVSNIPKIMVNESFPNLGRSMALNSSVAEFSTDPGFAERAAKFSCFGSRSFNGRTSHQLGLNNTELIQRSNPLMENGKLSRVSSTPSLKVLGSHKGNKNSPLRDLKEVTNSQEESTISEQTPNGDSGPKLSPFANLRKRKASSKGKAKETSTPINNSHTADEASEDLNAKRKKPNEGEGNENGPVKAEEDSRERTSNSGDEKQNKSNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTKLNFSIESLISKDIFQSNNSLTHPIFPLDSSAISFYGQYPQQNPAIHNNNPNGTVTHSSVDPLDSLCQNLGLQLPPLNGFNNEDGSQYPITFPEDDLHAIVQWDLNNCK* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2502 609 MobiDBLite consensus disorder prediction 319 336 - -
Aev06g2502 609 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 434 484 IPR011598 GO:0046983
Aev06g2502 609 MobiDBLite consensus disorder prediction 355 370 - -
Aev06g2502 609 MobiDBLite consensus disorder prediction 283 302 - -
Aev06g2502 609 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 62 603 IPR024097 GO:0006355
Aev06g2502 609 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 432 502 IPR036638 GO:0046983
Aev06g2502 609 Coils Coil 481 501 - -
Aev06g2502 609 Pfam Helix-loop-helix DNA-binding domain 438 485 IPR011598 GO:0046983
Aev06g2502 609 CDD bHLH_AtBPE_like 424 509 - -
Aev06g2502 609 MobiDBLite consensus disorder prediction 371 424 - -
Aev06g2502 609 PANTHER BHLH TRANSCRIPTION FACTOR 62 603 - -
Aev06g2502 609 SMART finulus 440 490 IPR011598 GO:0046983
Aev06g2502 609 MobiDBLite consensus disorder prediction 283 424 - -
Aev06g2502 609 Gene3D - 431 507 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2502 Aev-Chr6 25696833 25712722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2502 61 582 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 43.178 6.18e-106 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g2502 HLH 5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2502 - - gmx:100812081 736.873