Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2473 ATGGAGAAAGGACCTTCTACAGACATTCGATTAAGGTCAAGGAAAGCAACTTCATTAGATTGTTCTTGCTTTTTACGGTCTGGAATTGACATATGTGTTCAAATAGTGCCTAAATGTGACAACGATCATGATAAATCTTCTTCTCAACCTGTGTGGGTTGATGCCAAAATCAAATCCATACAGAGAAACCCCCATGACTCAGAATGCTCATGTCAATATTATGTCAACTTATATGTGATTCAAGGTTCAATTGGCACACAAAGAACGATTGTTAAGGAGGTTGAAATTGTTGGAATAAACCAAATTTCCATCCCACAAAGGCTTGATAATAATGCTCTTGAAAATAGTCCCTATCGATGGGTTTCAACTATGGATTGCTCCACAATACCTCAAACTAAGTTGCTTTGTGGGAAGTTCCTATCTGATATCTCATGGTTCATTGTTACATCTGTTTTAAAGAAGTTCTCATTCAACGTAAGATCTATTGACAACAAGATTGTGTATCAAGTTATGGCAGGTGATAAAGATAATAATGCCTACACACTAAATCATTTCTCTTTCATAAATGTTGTGAACTTCAAAGTAGACCAAGATGGCATAGTAAAACCATTTGTTACTCAAGTTGATACATCTGGAATCAAGAAAATTAGCAATACAAATGATTTCATTTCCCCTGAAGGTGAAGCACCTCCATCTTGTAATATCCAAGGATTAAAGCGTTCCATGCGGCACCATGTAGAACCCGAGCGTTACCAAGATTGTGATGCTTCCAATTTTAAGGATGTTCGTTCTATCAGAGCGTGTCCATACAAGGTAAGAGCAGGGAAAGATGTTGTTGATGATGATGATGAGTCAGTACCACTAGCATCAGAATATGGCTTCCAAGCAGAGAAGTGTCTAAGGGAAGATGTTGTTAAAAACAATAGAAAAAGGTGGAATTCTAGTAAGGGAATTGTCATTCAACCAAGACTAGAATCAAAAAATCATACTCCACTTTTTATCATTAATCCTTGTAAAGGTGATCCCTTTCTGCATATGGATTGCTCTCTCAATAACAAGGGGAATGTAGATGATGAAGAAGAAGATGTTGGTGAATTTTCTTCAAGGGGCTATCATATTTATGGTGCCTCTAGGAAGCGTAAGGAGAGTCCATCTAGTGTAAATAATGTTTACATTGAATCTATATGGGAAGGGAGAAACCTCAAAAATGGAGTTAAAGAGAAAAGATATCAGTCAACACTCTCAAGAAGTAGAAATGAAGACGATAAAGAAAGAGCTTATAAACACAGAACCATAAACTCAACTGCCAGCAAGGAAATGATAGATTCATACTTGAAGAATAATAAAATATCAAACAAGGAAGAACTAAACATAAAGAATCAATGCAATGAAACAAGCAATTGTAAGCAGGAAAATGGAGAGGGAACATCTCCAAAGAAGGAAGATGCAGAAATGTCTGAAATGGATAAGTTATGGAATGAGATGGACTCGTCATTGATATCGATTTACCTTCAAGAAGATGCTGTTTCTGCTGATACTGGAAAAATATGTGATCATGACAATAGATTGGATGAAGAGATTGGAATTTATTGTCTTAGATGCGGTGTTGTGAGTGTCGACATCACGAGTATCACCCCAGACTTTTTGCCACGCGTAAGAAGGCGCCATCAAGAGGAGGAGGAGCAAGAGAAGATGAAAGAGGAGGAGGAGAAAAAGAAACAAAATGTAGAACAAGAATCACATAATCAGGCTATATGTCAAGATTCTGCCATTGAAACTATATCTCAAGAAGATGCTAAAACTTGGGAATTGATTCCGGGGCTAAGAGGAAAGATGCATGTTCACCAGAGGAGAGCCTTTGAATTTCTTTGGCAAAACATAGTAGGGTCTACAGAACCATCACAAATGGAAGTAGAATCCAAAGATAGTGGTGGTTGTGTGATTTCTCATTGTCCAGGAGCAGGAAAAACTTTCCTTATCATCGCCTTTCTTACAAGCTTCTTGAAGCTTTTCCCGGGAAAAAGGCCATTGGTGTTAGCTCCAAAAACCACATTATACACTTGGCATAAGGAGTTTATCAAATGGGAGATTCCTATTCCTGTGTATTTGATTCATGGTAGCAAATCACATAGAGAGTTGAAGAAGACATCATTATCCATTCCTGGTGTTCCAAAGCCAACAAATGATGTAAATCATGTTTTGGATTGTTTAGAAAAGATACAAAAGTGGCGTGATCACCCCAGTGTTCTAATTATGGGATACACTTCATTTTTAGCAATGGTGAGAGATAATTCAAAGTATGAACACAGGAAGTACATAGCAAAAGAGATGAGAGAAAACCCTGGGTTGTTGATACTCGATGAAGGGCACAATCCAAGGAGTACCAAATCGAAGCTTAGGAAAGTTCTAATGACAGTAAAGACAGAGCATAGAGTTTTATTATCAGGTACATTATTTCAGAACAATTTTTGCGAGTACTTCAACACGTTGTGCTTGGCGAGGCCAAAGTTTATCCAAGAAGTGTTGAATGAACTAGACACCAAGTACGAGAAGCACAAGGTAGTAGAGAAAGCACCACATTTGGTTGAGGCGCGTGCTCGAAAGTTCTTCTTAGCCAAAATTGGCAAGATAATTAATTCAAAGGATGATGAATCTTTCGTTAGTGAAGAGAGTATACAAAGTATAAACTTGTTGAAAAAGCTTACAAGTGGTTTCATTGATGTTTATGAAGGTGGCAACCATGACACAATCCCAGGTTTGAAAATTTATACTTTGCTAATAAACACGACTGATGTACAAAAGAAGATTCTATACAAACTTCACAAGAAAATGGCAGACTATGATAGTTACCCTTTGGAGATAGAACTTCTGATAACACTTGGATCAATACATCCATGGCTGATAACAAAAGCAACATGA 2919 0.3741 MEKGPSTDIRLRSRKATSLDCSCFLRSGIDICVQIVPKCDNDHDKSSSQPVWVDAKIKSIQRNPHDSECSCQYYVNLYVIQGSIGTQRTIVKEVEIVGINQISIPQRLDNNALENSPYRWVSTMDCSTIPQTKLLCGKFLSDISWFIVTSVLKKFSFNVRSIDNKIVYQVMAGDKDNNAYTLNHFSFINVVNFKVDQDGIVKPFVTQVDTSGIKKISNTNDFISPEGEAPPSCNIQGLKRSMRHHVEPERYQDCDASNFKDVRSIRACPYKVRAGKDVVDDDDESVPLASEYGFQAEKCLREDVVKNNRKRWNSSKGIVIQPRLESKNHTPLFIINPCKGDPFLHMDCSLNNKGNVDDEEEDVGEFSSRGYHIYGASRKRKESPSSVNNVYIESIWEGRNLKNGVKEKRYQSTLSRSRNEDDKERAYKHRTINSTASKEMIDSYLKNNKISNKEELNIKNQCNETSNCKQENGEGTSPKKEDAEMSEMDKLWNEMDSSLISIYLQEDAVSADTGKICDHDNRLDEEIGIYCLRCGVVSVDITSITPDFLPRVRRRHQEEEEQEKMKEEEEKKKQNVEQESHNQAICQDSAIETISQEDAKTWELIPGLRGKMHVHQRRAFEFLWQNIVGSTEPSQMEVESKDSGGCVISHCPGAGKTFLIIAFLTSFLKLFPGKRPLVLAPKTTLYTWHKEFIKWEIPIPVYLIHGSKSHRELKKTSLSIPGVPKPTNDVNHVLDCLEKIQKWRDHPSVLIMGYTSFLAMVRDNSKYEHRKYIAKEMRENPGLLILDEGHNPRSTKSKLRKVLMTVKTEHRVLLSGTLFQNNFCEYFNTLCLARPKFIQEVLNELDTKYEKHKVVEKAPHLVEARARKFFLAKIGKIINSKDDESFVSEESIQSINLLKKLTSGFIDVYEGGNHDTIPGLKIYTLLINTTDVQKKILYKLHKKMADYDSYPLEIELLITLGSIHPWLITKAT* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2473 972 Pfam SNF2-related domain 612 848 IPR000330 GO:0005524|GO:0140658
Aev06g2473 972 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 2 971 IPR044567 GO:0080188
Aev06g2473 972 CDD DEXHc_ATRX-like 612 851 - -
Aev06g2473 972 MobiDBLite consensus disorder prediction 552 582 - -
Aev06g2473 972 Coils Coil 549 582 - -
Aev06g2473 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 591 850 IPR027417 -
Aev06g2473 972 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 2 971 - -
Aev06g2473 972 MobiDBLite consensus disorder prediction 552 578 - -
Aev06g2473 972 MobiDBLite consensus disorder prediction 464 484 - -
Aev06g2473 972 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 637 836 IPR014001 -
Aev06g2473 972 SMART ultradead3 608 841 IPR014001 -
Aev06g2473 972 Gene3D - 576 873 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2473 Aev-Chr6 25246716 25250798 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev06g2473 SNF2_N 3.5e-17 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2473 K10875 - gmx:100811703 914.835