Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2446 ATGCTAAATTTTGACAGATTTTCATGGAGCACAGCATCATTGAAGCTTTACTTGTCACCAAGTAGTCTGCCACTAAAGATTCCAGCATGCAATGGTCATAGTTTGGTTACATATACTGTGGACAATCGAGCGATTGATGACCTTGGACGTGAGGCTGTTATCTATGATTTATCGAAAAGAATTTATCAAATATGCAATAAGCGTTTTGTTTCCTGCATTATTGAGCTCAAGGTGATTCTATTAAACCATAGTGACTCTTACACGAGGGACAAGCAAATGCAAGTGACTGTCACTTACAACCATTTGGGAGAAGATTGCGCTTCCTATAGACCTGATGTGTGGGTTGAGAACCCTGAGAAATCAATTATTCTGTCTATAACCAGTGATATCCAGACTATAGAATCTGAGGTATTTGCTGCTCCCTACAGCCTGAGATTTCCTCGGATTGACAGGGTGAGATATGACAAAGCTTGGCATCAATGGCTTGATGTGCAATCATTCATAGAACTAGTGCAGTCTAGTAATGGTACTACTCAGATGGATACAGGCAGCAAGCAGGATAGTAAACCAAGACGAGTTTGA 582 0.4055 MLNFDRFSWSTASLKLYLSPSSLPLKIPACNGHSLVTYTVDNRAIDDLGREAVIYDLSKRIYQICNKRFVSCIIELKVILLNHSDSYTRDKQMQVTVTYNHLGEDCASYRPDVWVENPEKSIILSITSDIQTIESEVFAAPYSLRFPRIDRVRYDKAWHQWLDVQSFIELVQSSNGTTQMDTGSKQDSKPRRV* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2446 193 Gene3D - 56 177 IPR012340 -
Aev06g2446 193 SUPERFAMILY Nucleic acid-binding proteins 106 172 IPR012340 -
Aev06g2446 193 PANTHER DNA LIGASE 4 106 187 IPR029710 GO:0003677|GO:0003910|GO:0005524|GO:0006281|GO:0051103
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2446 Aev-Chr6 24773969 24779359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2446 77 111 Polysaccharide Lyase AT3G24230 62.857 4.28e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2446 K10777 - gmx:100816002 147.132